KEGG   Burkholderia sp. PAMC 28687: AX768_04265
Entry
AX768_04265       CDS       T05699                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
bui  Burkholderia sp. PAMC 28687
Pathway
bui02020  Two-component system
bui02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bui00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AX768_04265
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AX768_04265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bui03021]
    AX768_04265
Transcription machinery [BR:bui03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AX768_04265
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AMM13444
LinkDB
Position
1:complement(915338..916822)
AA seq 494 aa
MPPSLELRTKQSLALTPRLQQSVRLLQLSSLEFQQELRNALDTNPFLEYDETQAEDNALS
TDNGSSLSETPSLGEATAPVDAPMAAESSNDGSDSSDSQSHEDSMSEFSSDPFGRTSTRN
NGDGDGSDPADWVRIEPSLHETLHDTLRLYPINDRDRAVAQLIIEALDDDGYLRQDLQEL
SELVDIEPALSEAELNIALKLVQSLDKPGVGARTLSECLRLQLDALDADTPGRAVAIEIV
MHHLERLARREQAELQKKIGCSADELRVACALVRKLDPKPGSNYGAAEDNYVVPDVIVRQ
VKKNWVVTINPAVLPRARIHRMYAELFAQSAGASRSPLAQQLQEARWLIRNAQQRFTTIQ
RVAECIVSHQKAFFDYGEIALKPLVLRDVADELELHESTISRATGNKYMSTPRGIFEFKH
FFPRELSTESGGTCSAAAVRALLKEMIAKESSSEPLSDVSLAKMLADQGVIVARRTVAKY
RHLMKVPPAELRRA
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgccgccttccctcgaactacgtaccaagcaaagtcttgcgctcacgccgcgcctccag
caatcggttcgtctgctgcagctttcgtcgctcgagtttcagcaggaattgcgcaacgcg
ctcgataccaatcccttcctcgagtacgacgagacgcaagcggaagacaacgcgctttct
accgacaacggcagctccctgagcgagacgccctcgctcggcgaagccaccgcaccggtc
gacgcacccatggccgccgagagtagcaacgatggttcggacagcagcgactcgcagtcg
cacgaggactccatgagcgagttctcctccgatccgtttggccgtacatcgacacgcaac
aacggcgatggagacgggtccgatcccgcggattgggttcgcatcgaaccgtctttgcat
gaaacgcttcacgacaccctgcggctttatccaatcaacgatcgcgaccgcgcggtggcg
caactgatcatcgaagcactcgatgacgacggttacttgcgtcaggatttgcaggagttg
tccgagctcgtcgatatcgaaccggcattgtcagaagccgaattgaacatcgcgctgaag
ctcgtgcaatcgctcgataaacccggcgtcggcgcacgcacgttgtccgaatgcctgcgt
ctgcaactcgatgcactcgacgcggatacgccgggacgcgctgttgcgatcgagatcgtg
atgcatcatctggaacggctcgcacgccgtgagcaagccgagttgcaaaagaagatcggc
tgcagcgcggacgaactgcgcgtggcttgtgcgctcgtgcgcaagctcgatccgaagcca
ggttcgaattatggcgcagcagaagacaactacgtcgttcccgatgtgatcgtgcgccag
gtcaagaaaaactgggtcgtgacgatcaacccggcggttctcccgcgcgcccgtatccac
cgcatgtatgccgagctgttcgcgcaatcggctggtgcaagccgttcaccgctcgcccag
caactgcaggaagcacgctggctgatccgcaacgcacagcagcgcttcacgaccattcag
cgcgtggcagagtgcatcgtttcacatcagaaggcgttcttcgactatggcgaaatcgca
ctcaagccgctcgtcctgcgcgatgtcgccgatgagctcgaactccacgaatcgaccatt
tcacgcgcgacaggcaacaaatatatgtcgacgccgcgcggcattttcgagttcaagcat
ttcttcccgcgcgagttgagcacggaaagcggcggtacgtgttcggccgctgcagtgcgc
gcgttgctgaaagagatgatcgcaaaggagagcagcagcgaacccctttccgatgtcagc
ctcgcgaagatgctcgcggatcagggtgtgatcgttgcgcgccggacagtggcgaagtat
cgccacctgatgaaggtgccgccggccgagttgcgtcgcgcataa

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