Burkholderia sp. PAMC 28687: AX768_04265
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Entry
AX768_04265 CDS
T05699
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui02020
Two-component system
bui02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AX768_04265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AX768_04265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bui03021
]
AX768_04265
Transcription machinery [BR:
bui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AX768_04265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AMM13444
LinkDB
All DBs
Position
1:complement(915338..916822)
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AA seq
494 aa
AA seq
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MPPSLELRTKQSLALTPRLQQSVRLLQLSSLEFQQELRNALDTNPFLEYDETQAEDNALS
TDNGSSLSETPSLGEATAPVDAPMAAESSNDGSDSSDSQSHEDSMSEFSSDPFGRTSTRN
NGDGDGSDPADWVRIEPSLHETLHDTLRLYPINDRDRAVAQLIIEALDDDGYLRQDLQEL
SELVDIEPALSEAELNIALKLVQSLDKPGVGARTLSECLRLQLDALDADTPGRAVAIEIV
MHHLERLARREQAELQKKIGCSADELRVACALVRKLDPKPGSNYGAAEDNYVVPDVIVRQ
VKKNWVVTINPAVLPRARIHRMYAELFAQSAGASRSPLAQQLQEARWLIRNAQQRFTTIQ
RVAECIVSHQKAFFDYGEIALKPLVLRDVADELELHESTISRATGNKYMSTPRGIFEFKH
FFPRELSTESGGTCSAAAVRALLKEMIAKESSSEPLSDVSLAKMLADQGVIVARRTVAKY
RHLMKVPPAELRRA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgccgccttccctcgaactacgtaccaagcaaagtcttgcgctcacgccgcgcctccag
caatcggttcgtctgctgcagctttcgtcgctcgagtttcagcaggaattgcgcaacgcg
ctcgataccaatcccttcctcgagtacgacgagacgcaagcggaagacaacgcgctttct
accgacaacggcagctccctgagcgagacgccctcgctcggcgaagccaccgcaccggtc
gacgcacccatggccgccgagagtagcaacgatggttcggacagcagcgactcgcagtcg
cacgaggactccatgagcgagttctcctccgatccgtttggccgtacatcgacacgcaac
aacggcgatggagacgggtccgatcccgcggattgggttcgcatcgaaccgtctttgcat
gaaacgcttcacgacaccctgcggctttatccaatcaacgatcgcgaccgcgcggtggcg
caactgatcatcgaagcactcgatgacgacggttacttgcgtcaggatttgcaggagttg
tccgagctcgtcgatatcgaaccggcattgtcagaagccgaattgaacatcgcgctgaag
ctcgtgcaatcgctcgataaacccggcgtcggcgcacgcacgttgtccgaatgcctgcgt
ctgcaactcgatgcactcgacgcggatacgccgggacgcgctgttgcgatcgagatcgtg
atgcatcatctggaacggctcgcacgccgtgagcaagccgagttgcaaaagaagatcggc
tgcagcgcggacgaactgcgcgtggcttgtgcgctcgtgcgcaagctcgatccgaagcca
ggttcgaattatggcgcagcagaagacaactacgtcgttcccgatgtgatcgtgcgccag
gtcaagaaaaactgggtcgtgacgatcaacccggcggttctcccgcgcgcccgtatccac
cgcatgtatgccgagctgttcgcgcaatcggctggtgcaagccgttcaccgctcgcccag
caactgcaggaagcacgctggctgatccgcaacgcacagcagcgcttcacgaccattcag
cgcgtggcagagtgcatcgtttcacatcagaaggcgttcttcgactatggcgaaatcgca
ctcaagccgctcgtcctgcgcgatgtcgccgatgagctcgaactccacgaatcgaccatt
tcacgcgcgacaggcaacaaatatatgtcgacgccgcgcggcattttcgagttcaagcat
ttcttcccgcgcgagttgagcacggaaagcggcggtacgtgttcggccgctgcagtgcgc
gcgttgctgaaagagatgatcgcaaaggagagcagcagcgaacccctttccgatgtcagc
ctcgcgaagatgctcgcggatcagggtgtgatcgttgcgcgccggacagtggcgaagtat
cgccacctgatgaaggtgccgccggccgagttgcgtcgcgcataa
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