Bacteroides uniformis: Bun01g_00790
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Entry
Bun01g_00790 CDS
T06523
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bun
Bacteroides uniformis
Pathway
bun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bun01g_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bun03019
]
Bun01g_00790
03400 DNA repair and recombination proteins [BR:
bun03400
]
Bun01g_00790
Enzymes [BR:
bun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bun01g_00790
Messenger RNA biogenesis [BR:
bun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bun01g_00790
DNA repair and recombination proteins [BR:
bun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bun01g_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Glyco_transf_56
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BBK85709
UniProt:
A0A4Y1VDR8
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All DBs
Position
113602..115548
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AA seq
648 aa
AA seq
DB search
MSSSSNFKTPLPMGEGLGVRLLKQYWGYDTFRGIQEDIINSITEGRDTLGLMPTGGGKSI
TFQVPALAKEGLCLVITPLIALMKDQVQNLKKRGIKALAIYSGMSRQEIIVTLENCIFGN
FKFLYISPERLDTEIFRTKLQKMKISMITVDESHCISQWGYDFRPAYLKIAEIRTLLPGV
PVLALTATATPEVVKDIQARLHFREENVFCMSFERKNLAYIVRKTENKTGELLHILRRMP
GSAIIYVRNRRRTKEITELLHNEGITADFYHAGLDDATKDIRQQRWQTGESRVMVATNAF
GMGIDKPDVRIVIHMDLPDSIEAYFQEAGRAGRDGQKAYAVVLYAKSDKATLHKRIPDTF
PEKEYIKEVYEHLQYYYQMAMGDGQGCVREFNIEDFCRKFKYFPVPVDSALKILTQAGYL
EYTDEQDNASRLLFTIRRDELYKLRELGEDMDKLIQTILRSYTGVFTDHAFINEDSLAIR
TGLTRRQVYEQLIHLAKLHIVSYIPRKKTPYIIYTRERVEMRHLQIPSTVYEERKERYEK
RISAMLDYVSSDTVCRSRMLLHYFGEKNEHNCGQCDTCINLKNKKPSGHLSEKELSEKIL
QALSDKRQTPATLAEQIADDKNMLIDVLHGLLDEGKVIAVNGMLQIKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtagtaacttcaaaactcccctccctatgggggagggattgggggtgagg
cttctgaagcaatactggggatacgataccttccggggaatccaggaagatatcatcaac
agcattaccgagggacgggacactttgggactaatgcccacgggaggaggaaaatccatc
actttccaagttccggcacttgctaaagaaggactttgcctggtcatcactccgttgatt
gccctcatgaaagaccaggtacaaaacctgaaaaagcggggaatcaaggcgcttgccatc
tactcaggcatgagcaggcaggaaatcatcgtcacactggagaactgtatattcggcaat
ttcaagttcctctatatctcccccgaaaggctcgatactgaaatcttccgcaccaaactg
cagaagatgaaaatcagtatgattacggtagacgaaagccactgcatatcgcaatggggc
tacgacttccgtcctgcctatctgaagatagccgagatacgcacactgctacccggtgta
cccgtgctggcactgacagccactgccactccggaagtagtgaaagatatccaggcccgt
ctgcatttccgtgaggaaaatgtgttctgcatgagtttcgagcgcaaaaatctcgcctat
atcgtccgtaaaacggaaaacaagacgggagagctgttgcacatcctgcgccgtatgccc
ggaagcgccatcatctatgtgcgcaaccgccgccgcaccaaggaaattaccgaactgctg
cacaacgaaggcatcaccgcagatttctaccatgccggactggatgacgccaccaaagac
atccgccaacaacgctggcaaacaggagaaagccgtgtcatggtcgccaccaatgcattc
ggtatgggtatcgacaaaccggatgtacggattgtcatccacatggacctgcccgattcc
atagaagcctacttccaggaagcaggacgtgccggaagggacggacaaaaagcctacgcg
gtcgtcctttacgccaagtcggataaggcaacactgcacaaacgcattcccgacaccttt
cctgaaaaagagtatataaaggaagtatatgagcatcttcaatactattaccagatggca
atgggagacggacaaggctgtgtacgcgagttcaatatagaagacttttgtcgaaagttc
aagtacttccccgttcccgtggacagtgccttgaagattctgacacaagcgggatacctg
gaatatacagacgaacaagacaatgcatcccggctactgttcactatccgtcgagatgaa
ctttataaactgagagagctcggcgaagatatggacaaactcatccaaaccattctccgc
tcctataccggggttttcacagaccatgctttcatcaatgaagattcactggccatacgc
actggactcacacgccggcaagtgtatgaacagctcatccacctagccaagctacatatc
gtcagttacatcccccgcaaaaagacaccatatataatatacacgcgagagagggttgaa
atgcgccacctgcaaatcccttccaccgtgtacgaggaacgcaaagagcgatatgagaaa
cgcataagtgccatgctggattacgtgagcagcgataccgtgtgccgtagccggatgctg
ctacactacttcggagagaagaacgagcataactgcgggcagtgcgacacttgcatcaat
ttgaagaacaagaaaccttccggccacctttcggaaaaggaactttctgaaaagattctt
caagccctatctgataaacgacaaactccagccactttggcagaacagatagcagacgat
aaaaacatgctcatcgatgtgttacatggattgttggacgaaggcaaggtaattgctgtc
aacggaatgcttcaaatcaaaaaataa
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