Burkholderia sp. HB1: AC233_06430
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Entry
AC233_06430 CDS
T04094
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AC233_06430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_06430
Enzymes [BR:
buq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AC233_06430
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AC233_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
RecD_N
SLFN-g3_helicase
DEAD
AAA_22
T2SSE
MukB
UvrD_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
ALE54390
LinkDB
All DBs
Position
1:1506056..1508422
Genome browser
AA seq
788 aa
AA seq
DB search
MSTFDRDASVPLASVPSLQLEDIGVNLPAPADFSIALAEGFARRIGALARRGGASGDAVK
WAARAAFAASRATAEGHVCVPLASLAQRFEASAAEVRAALFASGMASGMASDGASGAAAL
RPLVIDGQGRLYLARYYDYERRLARALVAHAGAAHRFSDAAAPWLAGRSGTAGGARSDEA
VGARKVAGGDADATSNAATDATTGATTNATTNATTNATSNATSNASTNADDTQTLNERLL
RYFGPPKDDQVDWQRVAAVMALSGRLTIVSGGPGTGKTTTVVGVLACLLDTRADLRIALA
APTGKAAQRMQEALLARAGDLPPELAARLPQTSYTLHRLLGSGPGGRFRHHRDNPLPYDV
VVIDEASMIDVAMAAHLLDAIAPHTRLVMLGDKDQLAAVEAGAVFAELSAQPAFTAQGVK
RIAGALGVEEARLVQSLPRVGRDIDADAGRFTKGSHLPDSDGDDVPDLFRGPEDDVFSEP
VAARSAAQPVTADLFDADVSSNNLRPAPAAQQPPSPLADCVVWLERNYRFGLESPIGRLS
LAIRNGAASAALDVLLADATQAAAVLHEDAQATLTERTVERLAAGFAPYARALAAALAEA
TPNPLPLFDALNRFRVLCATRSGARGVDQVNALMAAQVRRVAGVTLAVGAQWFAGRPVMV
TRNDYALGLFNGDIGIALPGAGGALRVYFRTGDGGLRAVSPAALPPHDTAFALTVHKSQG
SEFEHAVLMLPSAFSRVLSRELVYTAITRARERVEVIGARAVLAQAIATPTQRDSGLAAR
IAEASRGR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcgatcgggacgcatcggtgccgttggcgtcggtgccgtcgttgcaactc
gaagacatcggcgtcaatctgcctgcgccggctgatttcagcattgcgctcgcggagggt
ttcgcacgccgcattggcgcattggcgcgacgcggcggcgcatccggcgacgcggtcaag
tgggcggcgcgcgctgctttcgccgcgagtcgcgcgaccgcggaagggcacgtgtgtgtg
ccgcttgcgtcgctcgcgcagcgcttcgaggcgtccgctgccgaagtacgcgcggcgttg
ttcgcgagcggtatggcgagcggtatggcgagcgacggcgcgagcggcgcggcggcgctg
cggccgcttgttatcgacggacaagggcggctgtacctcgcgcgctactacgattacgaa
cggcgtctcgcacgggcgctggtcgcgcatgcgggcgcggctcaccgtttttccgatgcc
gcggcgccgtggctcgccgggcgttccgggacagcgggcggtgcgcgtagcgacgaggcg
gtcggtgcaagaaaggtggcgggcggcgatgccgacgccacctcgaacgcggccaccgac
gccaccactggcgccaccaccaacgccaccaccaacgccaccaccaacgccacctccaac
gccacctccaacgcctccaccaacgccgacgacacccaaacgctcaacgagcgtctccta
cgctacttcggcccgccgaaggacgaccaggtcgattggcagcgcgtggctgccgtgatg
gcgctgtcgggacggctcacgattgtcagcggcggcccgggcacgggcaagacgacgacg
gtggtcggcgtgctcgcgtgtctgctcgatacgcgcgccgatttgcggatcgcgcttgcc
gcgcctaccggcaaggcggcgcagcgcatgcaggaagccctcctcgcgcgcgccggcgat
ctgccgcccgagctggccgcgcgtttgccgcagacgtcgtatacgttgcatcggctgctc
ggctcggggccgggcgggcgcttccggcatcatcgggataatccattgccgtatgacgtc
gtcgtgatcgacgaggcgtcgatgatcgacgtcgcgatggccgcgcatctgctcgacgcg
attgcaccgcatacgcggctcgtgatgctcggcgacaaggatcagctcgcggcggtcgag
gccggcgccgtgttcgcggaattgagcgcccagccagcttttaccgcgcaaggggtgaag
cggattgccggcgctttgggcgtggaggaggcgcggctggtgcagtcgctgccgcgagtc
gggcgggacatcgacgcggacgccgggcgtttcacgaaaggctcgcacttgcccgacagc
gatggcgatgacgtccccgatcttttccgcggccccgaagacgacgttttctcagagccc
gttgcggcccgttccgctgcccaaccagtcactgcggacctctttgacgccgacgtctcc
agcaacaacttgcgccccgcgccggccgctcagcagccgccaagcccgctcgcggattgc
gtcgtgtggctcgagcgcaattatcggttcgggctcgaatcgccgatcggccgcctgtcg
ttggcgattcgcaatggcgcggcgagcgcagcgctcgacgtgctgctcgccgacgcgacg
caagctgcggccgtgcttcacgaagacgcgcaggcgacgctgaccgagcgcaccgtcgag
cgcctcgccgccggcttcgcgccttatgcgcgagcgctggccgcagcgctcgccgaggcg
acgccgaacccgttgccgctattcgacgcgctcaatcgcttccgtgttttgtgcgcgacg
cgctccggcgcgcgcggcgtcgatcaggtgaacgcgctgatggcggcgcaggtgcggcgc
gtggccggcgtcacgctcgcagtcggtgcgcagtggtttgccgggcggccggtgatggtc
acgcgcaacgactacgcgctggggcttttcaatggcgacatcggcattgcgctgccgggc
gcgggcggtgcgctgcgggtctattttcgcaccggcgatggcggtctgcgagccgtgtcg
cccgccgcgctgccgccgcacgacaccgcgttcgcgctgacggtgcacaagtcgcaaggc
tcggagttcgagcatgcggttctgatgctgccgtccgcattcagcagggtgctgtcgcgc
gaactggtttatacggcgatcacgcgcgctcgtgaacgggtcgaggtgatcggggcgcgc
gcggtgctggcgcaggcgatcgcgacgccgacgcagcgcgactcggggcttgccgcgaga
attgcggaggcgtcgcgggggcgttag
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