Burkholderia sp. HB1: AC233_20085
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Entry
AC233_20085 CDS
T04094
Name
(GenBank) 2-hydroxyacid dehydrogenase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
buq
Burkholderia sp. HB1
Pathway
buq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AC233_20085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_20085
Enzymes [BR:
buq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AC233_20085
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AC233_20085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALE56782
LinkDB
All DBs
Position
2:complement(16328..17002)
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AA seq
224 aa
AA seq
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MVTTKRTPKRTPKRPSSSEGEEPAAPEVDPDQHPATLDDCRRCPLWANATQGVPGAGPRR
APIMMVGEQPGDKEDLQGLPFVGPAGALLDDALVEAGVGRKEVYVTNAVKHFKWTPRGKR
RMHKTPGQREVDACRYWLDQELESVGAHVIVALGATALKAVLEDPKSRLQDAIGKVIEHG
DRLVVATYHPSFALRAPDPETRHRAYAAIVAALQDAKKLAQRRK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggttaccacgaagcgcacaccgaagcgcacacccaagcgcccatcatcctcggaaggc
gaagagccggccgcgcccgaggtcgatcccgaccagcatcccgcgacactcgacgattgc
cgccgctgtccgctctgggccaacgcgacccaaggcgtgccgggcgccggtccacgccgc
gcgccgatcatgatggtcggcgagcagccgggcgacaaggaagatctgcaaggcttgccg
tttgtcggcccagccggcgcgttgctcgacgacgcgctcgtcgaagccggcgtcggtcgc
aaggaagtctatgtgaccaacgcggtcaagcatttcaaatggacgccgcgcggcaagcgc
cgcatgcataaaacgccggggcaacgcgaggtggacgcgtgccgctactggctcgatcag
gaactagagagcgtcggcgctcacgtgatcgtcgccttgggcgcgaccgcgctgaaggcc
gtgctcgaagatccgaagtcgcgcttgcaggacgcgatcggcaaggtcatcgaacatggc
gaccggctcgtggtcgcgacgtatcatccttcgttcgccttgcgtgcgcccgatcccgag
acgcgtcatcgcgcgtatgcggcgatcgtcgccgcgctgcaggacgcgaagaaactcgcg
cagcggcgcaaatag
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