Paraburkholderia phytofirmans OLGA172: AYM40_14965
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Entry
AYM40_14965 CDS
T05111
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buz03019
]
AYM40_14965
03009 Ribosome biogenesis [BR:
buz03009
]
AYM40_14965
Messenger RNA biogenesis [BR:
buz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AYM40_14965
Ribosome biogenesis [BR:
buz03009
]
Eukaryotic type
Pre-60S particles
RNases
AYM40_14965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANB73508
UniProt:
A0A160FMS2
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All DBs
Position
1:complement(3419403..3420020)
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AA seq
205 aa
AA seq
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MTDILASTEPPSLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRLVEGPVLAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLAQYVPPGKSPMCGNS
ICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASQVPETPAAE
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaaccgccgtcgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgaaccggacactgaccgcatcatcgaaatc
gcggtggtggtgacgaattcgacgctcgaccggttggtcgaaggcccggtgctggcgatt
catcagagcgacgagacgctcgccaaaatggatcagtggaaccagaacacgcatggccgc
tcgggcctgatcgatcgcgtgaaggcgtcgacggtgagtgaagccgacgccacagaacag
attcgcgactttctcgcgcaatacgtgccgccgggcaaatcgccgatgtgcggcaattcg
atctgccaggaccgccgcttcatggcgcgctggatgccggatctggaacgtttcttccat
taccgcaatctcgacgtcagcacgctgaaggaactgtgccgccgctggcagccggcgatc
tacaagggtttccagaaacgcgcgatgcacacggcgctggccgatatccacgaatcgatc
gacgaactgaagtactaccgcgaacacttcctgattccggcggcctcgcaggtcccggaa
acgcccgccgcggaataa
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