KEGG   Paraburkholderia phytofirmans OLGA172: AYM40_14965
Entry
AYM40_14965       CDS       T05111                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
buz  Paraburkholderia phytofirmans OLGA172
Brite
KEGG Orthology (KO) [BR:buz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:buz03019]
    AYM40_14965
   03009 Ribosome biogenesis [BR:buz03009]
    AYM40_14965
Messenger RNA biogenesis [BR:buz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AYM40_14965
Ribosome biogenesis [BR:buz03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    AYM40_14965
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ANB73508
UniProt: A0A160FMS2
LinkDB
Position
1:complement(3419403..3420020)
AA seq 205 aa
MTDILASTEPPSLVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSTLDRLVEGPVLAI
HQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLAQYVPPGKSPMCGNS
ICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASQVPETPAAE
NT seq 618 nt   +upstreamnt  +downstreamnt
atgactgacatcctcgcatccaccgaaccgccgtcgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgaaccggacactgaccgcatcatcgaaatc
gcggtggtggtgacgaattcgacgctcgaccggttggtcgaaggcccggtgctggcgatt
catcagagcgacgagacgctcgccaaaatggatcagtggaaccagaacacgcatggccgc
tcgggcctgatcgatcgcgtgaaggcgtcgacggtgagtgaagccgacgccacagaacag
attcgcgactttctcgcgcaatacgtgccgccgggcaaatcgccgatgtgcggcaattcg
atctgccaggaccgccgcttcatggcgcgctggatgccggatctggaacgtttcttccat
taccgcaatctcgacgtcagcacgctgaaggaactgtgccgccgctggcagccggcgatc
tacaagggtttccagaaacgcgcgatgcacacggcgctggccgatatccacgaatcgatc
gacgaactgaagtactaccgcgaacacttcctgattccggcggcctcgcaggtcccggaa
acgcccgccgcggaataa

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