Burkholderia vietnamiensis G4: Bcep1808_0323
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Entry
Bcep1808_0323 CDS
T00493
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bvi
Burkholderia vietnamiensis G4
Pathway
bvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcep1808_0323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvi03021
]
Bcep1808_0323
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_0323
Enzymes [BR:
bvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcep1808_0323
Transcription machinery [BR:
bvi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcep1808_0323
DNA repair and recombination proteins [BR:
bvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcep1808_0323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
DUF6744
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
ABO53336
UniProt:
A4JAN3
LinkDB
All DBs
Position
1:364488..368729
Genome browser
AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNAKGEGLSFTGVSEVIRAYENK
EVELASRVNVRITEMVRNEDTSEGAPQFVPKISLYATTVGRAILSEILPHGLPFSVLNKP
LKKKEISRLINTAFRKCGLRATVVFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLSTEPVIDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETLYESGTLLDETAVEEIERLGIDEVRVRTPLTCETRYGLC
AACYGRDLGRGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GIVRFTATMRYVTNAKGEQIVISRSGEALITDDIGRERERHKIPYGATLLQLDGATIKAG
TQLATWDPMTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPGTEHAVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDAQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDRMIAEGKRPASYDNVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKAKEM
SDRERFDQIAAEEAFDFGTPSAPAEEPQHPAAE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagttttcgacgcgatc
aagatcggtctggcctcgccggacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgtacgttcaagccggaacgcgatggtctgttctgcgcgaag
atcttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtcgaagtgacgctggcgaaggtgcgtcgcgaa
cgcatgggccacatcgagctggcctcgccggtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgaacgcgtgctgtac
ttcgaagcgtacgtggtgatcgaaccgggcatgacgccgctgaaggcgcggcagatcatg
accgaagaggattactacaacaaggtcgaggaatacggcgacgaattccgtgccgagatg
ggcgcggaaggcgtgcgtgagctgctgcgcgcgatcaacatcgacgagcaggtcgagacg
ctgcgcaccgagctgaagaacaccggctcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtcctcgaggcattccagcgctcgggcatcaagcccgagtggatgatcctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctggacggcggccgtttc
gcgacgtcggacctgaacgacctgtatcgccgcgtgatcaaccgtaacaaccggttgaag
cgtctgctcgagctgaaggcgcctgaaatcatcgtccgcaacgaaaagcggatgctgcag
gaagccgtcgactcgctgctcgacaacggccgtcgcggcaaggcgatgacgggcgcgaac
aagcgtccgctgaagtcgcttgccgacatgatcaagggtaagggcggtcgcttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctggaagtgatgggcgtcgcgacgaccatcaaggctgcgaagaaggaa
gtcgagaaccagacgccggtcgtgtgggacatcctcgaagaggtgatccgcgagcatcca
gtgatgctgaaccgtgcgccgacgctgcaccgtctcggtatccaggcgttcgagccggtg
ctgatcgaaggcaaggcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgac
ttcgacggtgaccagatggccgttcacgtgccgctgtcgctcgaagcgcagatggaagcg
cgcacgctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggtctgtactacgcgacccgcgaagcggtcaacgcg
aagggcgaaggcctctcgttcaccggcgtgtcggaagtgatccgcgcgtacgagaacaag
gaagtcgagctcgcatcgcgcgtgaacgtgcggatcaccgaaatggtccgcaacgaggac
acgtcggaaggcgcgccgcaattcgtgccgaagatctcgctgtacgcgacgaccgtcggc
cgcgcgatcctgtcggagatcctgccgcacggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgcctgatcaacaccgcgttccgcaagtgcggtctgcgt
gcgacggtcgtgttcgccgaccagctgatgcagtcgggtttccgtctcgcgacgcgtgcc
ggtatttcgatctgcgtggacgacatgctcgtgccgccgcagaaggaaacgatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgtcagtacatgtcgggtctcgtcaccgcg
caggaacgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggagcagctgtcgacggagccggtgatcgaccgcgacggcaacgagacgcgc
caggagtcgttcaactcgatctacatgatggccgactcgggcgcccggggttcggcggtg
cagattcgtcagctggccggtatgcgtggcctgatggcgaagccggacggctccattatc
gagacgccgattaccgcgaacttccgcgaaggcctgaacgtgctgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctcgtcgacgtcacgcaggatctggtggtggtcgaggacgattgcggc
acgtcgaacggcgtcgcgatgaaggcgctggtcgaaggcggtgaagtcgtcgaagcgctg
cgcgaccgtatcctcggccgcgtcgctgtggcggacgtcgtcaatccggaaacgcaggaa
acgctgtacgaatcgggcacgctgctcgacgaaacggcggtcgaggaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgcacgccgctgacctgcgaaacgcgctacggtctgtgc
gcggcctgctacggccgcgacctcggccgcggctcgctggtgaacgtcggcgaagcagtc
ggcgtgatcgcggcacagtcgatcggcgaaccgggcacgcagctgacgatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcgtcgtcggtcgaagcgaagagcaac
ggtatcgtgcgtttcacggcgacgatgcgctacgtgacgaacgcgaagggcgagcagatc
gtcatttcgcgctcgggcgaggcgctgatcaccgacgatatcggccgcgagcgcgaacgt
cacaagatcccgtacggcgcgacgctgctgcagctcgacggtgcgacgatcaaggccggc
acgcagctggcgacgtgggacccgatgacgcgtccgatcatcaccgagtacggtggtacg
gtgaagttcgagaacgtcgaggaaggcgtgaccgtcgcgaagcagatcgacgacgtgacc
ggtctgtcgacgctggtcgtgatcgacgtgaagcgccgcggttcgcaggcgtcgaagagc
gtgcgtccgcaggtgaagttgctcgacgcgaacggcgaggaagtgaagatcccgggcacg
gagcacgcggtgcagatcggcttccaggtcggcgcactgatcaccgtgaaggacggtcag
caagtgcaggtgggtgaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgac
attaccggcggtctgccgcgggtggcggaactgttcgaagcgcgttcgccgaaggatgcg
ggcattctcgcggaagtcaccggcacgacgtcgttcggcaaggacacgaagggcaagcag
cgtctcgtcatcacggacctcgaaggcaatcagcacgagttcctgatcgcgaaggaaaag
caggtgctggtccacgatgctcaggtcgtcaacaagggcgaaatgatcgtggacggcccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaggcgctgtcgcgctacatcgtc
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgttcgccagatgctgcgtcgtgtgcagatcaccgacaacggcgatacgcgcttc
atcccgggcgaacaggtcgagcgttccgacatgctggacgagaacgatcgcatgatcgcc
gagggcaagcgcccggcttcgtacgacaacgtgctgctcggtatcacgaaggcgtcgctg
tcgaccgactcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatctgcgcggcctgaaggaaaacgtgatcgtcggc
cgtctgattccggccggtacgggtctcgcgttccacaaggcacgcaaggcgaaggagatg
tccgaccgcgagcgtttcgaccagatcgcagcggaagaggcattcgacttcggcacgccg
agcgcgcccgcggaagagccgcaacacccggcagccgaataa
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integrated database retrieval system
