Burkholderia vietnamiensis G4: Bcep1808_5895
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Entry
Bcep1808_5895 CDS
T00493
Name
(GenBank) deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bvi
Burkholderia vietnamiensis G4
Brite
KEGG Orthology (KO) [BR:
bvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvi03400
]
Bcep1808_5895
Enzymes [BR:
bvi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Bcep1808_5895
DNA repair and recombination proteins [BR:
bvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Bcep1808_5895
Prokaryotic type
Bcep1808_5895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABO58823
UniProt:
A4JRC0
LinkDB
All DBs
Position
3:complement(485358..486875)
Genome browser
AA seq
505 aa
AA seq
DB search
MTRSDLPHEARPVVVWFRDDQRLADNPALTHALDTGHPVVCVYVHDAAPKHGRAMGGAQR
WWLHESLSKLDDALAAHGGSLILLRGNEHEAITGFAAAIGAAMVVWNRRYAKAQTGTDAS
IKRDLIDRGIAVSTFNGHLLREPWTVTTREGLPFQVFSAYWRAARRDDFFPPVPLPAPSH
IRFFPVPAHATPHVCTLRELELQPSAPDWAGGLRETWQCGEQAASDQLEAFLENSLSDYP
TLRDFPAARATSRLSPYLRFGNISVRQVWYATLSAADAMRSARIVRGVDSKDGPLSKFLS
EIGWREFSYHLLYHFAPLHQVNFRRQFDSMPWRDDAKSLRKWQTGRTGYPLVDAGMRELW
HTGWMHNRVRMVAASFLSKHLLIDWRQGEAWFWDTLVDADEASNPASWQWVSGSGADAAP
YFRIFNPVLQAQKFDPHGDYTRRWVPELAQLSADTVHAPWAASREQLQRASVTLGRSYPM
PIVDHQCARARALESVKRLDSESHA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctccgaccttccgcacgaagctcgccccgtcgtcgtatggttccgcgacgac
caacggctggccgacaaccccgcgctgacgcatgcgctcgacaccgggcacccggtcgtt
tgcgtgtatgtgcacgacgccgcgccgaaacacggtcgtgcgatgggcggcgcgcagcgc
tggtggctccatgaatcgctgagcaaactcgacgacgcgctcgcggcgcatggcggctcg
ctgattctgctgcgcggcaacgagcatgaagcgatcaccggtttcgccgcagcgatcggc
gcggcgatggtcgtctggaaccggcgttacgcgaaggcgcagaccggcaccgatgcgtcg
atcaagagagacttgatcgaccgcgggatcgccgtgtcgacgttcaacgggcacctgctg
cgcgaaccgtggacggtgaccacgcgcgaaggcctgccgttccaggtcttcagcgcgtac
tggagagccgctcggcgcgacgattttttcccgccggttccgctgccggcgccgtcgcac
atccggttttttccggttccagcccacgcgacgccacacgtctgcacgcttcgcgagctc
gagctgcagccgtcggctcccgactgggccggcgggctgcgtgagacctggcagtgcggc
gagcaagccgccagcgatcaactcgaagcattcctggagaattcgctgtccgactatccg
acgctgcgcgattttccggccgctcgcgcgacgagccggctgtcgccgtatctgcgcttc
ggcaacatatcggttcggcaggtttggtacgcgacgctgtcggcggccgatgcaatgcga
agtgcgcgcatcgtgcgcggcgtcgactcaaaggacgggccgttgagcaagttcctcagc
gaaatcggctggcgagaattctcgtaccacctcctgtatcacttcgcgccgcttcatcag
gtcaatttccgccggcagttcgattcgatgccgtggcgcgacgacgcgaagtcactgcgc
aagtggcagacgggccgcacgggctacccgctcgtcgatgccggcatgcgcgagctgtgg
cataccggctggatgcacaaccgcgtgcgcatggtggcggcgtcgtttctgtcgaaacac
ttgctgatcgactggcgacagggcgaagcatggttctgggatacgctggtcgatgccgac
gaggcgagcaatcccgcgagctggcagtgggtgtcgggcagcggcgccgacgcggcgccg
tatttccgcatcttcaatccggttctgcaggcgcagaagttcgatccgcacggcgactac
acgcgtcgctgggtgcccgagctcgcgcagctttccgcagacaccgtccacgcgccatgg
gccgcgtcgcgcgagcagttgcaacgcgcgtccgtcacgctcgggcgaagctatccgatg
ccgatcgtcgatcatcagtgcgcgcgtgcacgcgcgctggaatcggtgaagcggctcgat
tcggaaagccatgcgtag
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