Heyndrickxia vini: I5776_12775
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Entry
I5776_12775 CDS
T07201
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj00020
Citrate cycle (TCA cycle)
bvj00640
Propanoate metabolism
bvj00660
C5-Branched dibasic acid metabolism
bvj01100
Metabolic pathways
bvj01110
Biosynthesis of secondary metabolites
bvj01120
Microbial metabolism in diverse environments
bvj01200
Carbon metabolism
Module
bvj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bvj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I5776_12775 (sucD)
00640 Propanoate metabolism
I5776_12775 (sucD)
00660 C5-Branched dibasic acid metabolism
I5776_12775 (sucD)
Enzymes [BR:
bvj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
I5776_12775 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQZ07958
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All DBs
Position
complement(2557414..2558316)
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AA seq
300 aa
AA seq
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MSVFVNKDTKVIVQGITGKTALFHTKQMLEYGTKIVGGTSPGKGGTEVEGVPVFNTVEEA
VKATGANASVIYVPAPFAADAILEAVDAELDLTICITEHIPVLDMVKVKRYMEGKKTRLV
GPNCPGVITPEECKIGIMPGYIHTKGHVGVVSRSGTLTYEAVHQLSQAGIGQTTAVGIGG
DPVNGTDFIDVLKAFNEDPETEAVIMIGEIGGTAEEEAANWVKANMTKPVVGFIGGVTAP
PGKRMGHAGAIISGGKGTAAEKIRVMNECGIKVAATPSVMGETLIEVLKERGLYEKCKTH
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtttttgttaataaagatacaaaagtaatcgttcaaggtattactggtaaaaca
gctcttttccatacaaaacaaatgctagaatatggtaccaaaatcgttggtggaacatca
ccaggtaaaggcggaacagaagttgaaggtgtaccagtatttaatacagttgaagaagct
gtaaaagctactggtgctaatgcttctgttatctatgttccagctccttttgctgctgat
gcaattttggaagctgttgacgcggaattagacttaacaatctgtatcactgaacatatt
ccagtattagatatggtaaaagttaaacgttatatggaaggcaaaaagactcgtttagta
ggtcctaactgtcctggtgttatcactccagaagaatgtaaaatcggtataatgcctgga
tacattcatacaaaaggacatgttggtgttgtatcacgttctggtacattaacttatgaa
gcagttcatcaattatcacaagcgggtattggacaaacaacagctgtaggtatcggtgga
gatcctgttaatggaactgattttattgatgtattaaaagcattcaatgaagatccagaa
acagaagctgtaattatgattggtgaaatcggtggtactgctgaagaagaagctgctaac
tgggtgaaagctaatatgacaaaaccagttgttggatttatcggcggtgtaacagcacct
cctggaaaacgtatgggacatgctggtgcgattatttccggtgggaaaggtacagctgca
gaaaaaatccgtgtcatgaatgaatgcggtattaaagttgcagcaacaccatcagtaatg
ggtgaaacattaattgaagttcttaaagaaagaggactttacgaaaagtgtaaaacacat
taa
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