Blastochloris viridis: BVIR_1236
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Entry
BVIR_1236 CDS
T04109
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K19789
DNA repair protein RadD
Organism
bvr
Blastochloris viridis
Brite
KEGG Orthology (KO) [BR:
bvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvr03400
]
BVIR_1236
DNA repair and recombination proteins [BR:
bvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BVIR_1236
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
AAA_30
zinc_ribbon_2
SLFN-g3_helicase
DZR
AAA_22
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ALK09025
UniProt:
A0A0H5BKC8
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All DBs
Position
complement(1363900..1365603)
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AA seq
567 aa
AA seq
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MLLRPRQKQFVERSVRALDEHGNTLGVAPTGAGKSIMLSAVAGRMVGETPKSTEAKACVL
AHRDELTAQNRTKFGRVNPKITTSVIDAKEKSWAGQVTFAMVPTLARAGNLDQLPALDLL
VIDEAHHAAADSYRRIIDTALQRNPMCRIYGVTATPNRGDKRGLRPVFSNVADQIRIGEL
IASGHLVPPRTFVIDVGVQDQLSKVRRTADDFDMAEVDAIMNRSPVTDAVIRHWREKAGE
RQTVVFCSTVDHARNVTAAFNAAGAAAGLVHGDMTDTDRKATLGAYAAGELRVVVNVAVL
TEGWDHPPTSCVVLLRPSSYKSTMIQMVGRGLRTVSPEEHPGVVKTDCIVLDFGTSTLLH
GSLEQDVDLNGREPAGEAPTKICPQCEAEVPLGCTECPLCGHVWERADGGEATPLGDFVM
SEIDLLKRSSFRWCDLFGDDAALIANGFNAWGGIFFLGGRWYGIGGLQKQRPRLLAMGER
TICLAAADDWLNENETDETAHKTRRWLNQPPTDRQLAFLPSECRQDFGLTRYQASALITF
RFNRDAIRSLVFGAAEAAPEAVIGRAA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccggccccgccagaagcagttcgtcgagcgtagcgtccgcgcgctcgacgag
catggaaacaccctcggcgtcgcgcctaccggggcgggaaagtcgatcatgctctcggcg
gtcgccgggcgcatggtcggcgaaaccccaaagagcaccgaagccaaggcctgtgtgctc
gcccaccgcgatgagcttacagcgcagaaccgaaccaagttcggtcgggtgaacccgaag
atcacgacctcggtcatcgacgccaaggagaaatcctgggctggccaggtcaccttcgcg
atggtgcccacgctcgcgcgtgctggcaacttggatcagctgccagcgctcgatctcctg
gtgatcgacgaggcgcaccacgcggcggcggacagttatcgccgcatcatcgacaccgcg
ctgcagcgcaatcccatgtgccggatctacggcgtcacggcgactcccaaccggggcgac
aagcgcggtctgcgtccggtgttctcgaacgtcgccgaccagatccggatcggcgaactg
atcgcatccggccatctcgtgccgccccgcaccttcgtgatcgatgtcggcgtccaagat
cagctctccaaggtgcgcaggaccgctgacgatttcgacatggccgaggtcgacgcgatc
atgaaccgctcgccggtcacggacgcggtcatccgccactggcgggaaaaggcgggcgag
cgccagacggtggtgttctgttcgacagtcgaccacgcacgcaacgtgaccgccgccttc
aacgcggcgggcgccgcggcggggctggtccacggcgacatgaccgacaccgaccgcaag
gcgacgctcggcgcctatgccgccggggaactgagggtggtcgtcaatgtcgcggtcctg
accgaaggctgggatcacccgccgacgagttgcgtcgtgctgctgcggccgagctcctac
aagtcgaccatgatccagatggtcggccggggcctgcgcacggtttcgcccgaagagcat
ccaggcgtcgttaagaccgactgcatcgtgctcgatttcggcacatcgaccctgttgcat
ggatcgctggagcaggacgtcgacctcaacggccgcgagcccgccggcgaggcgccgacc
aaaatctgcccgcagtgcgaggccgaggtgccgctcggctgcaccgagtgcccgctctgt
ggccacgtctgggagcgcgccgacggtggcgaggcgacgccgctcggcgacttcgtgatg
agcgagatcgatcttctgaagcggtcgagtttccgctggtgcgatctcttcggcgatgat
gccgcgctcatcgcgaacggcttcaacgcctggggcggcatcttcttcctcggtggccgc
tggtacggcatcggtggcctgcagaagcagcgcccgcggctgttggccatgggcgaacgc
accatctgcctcgcggccgccgacgactggctgaacgaaaatgagaccgacgaaaccgcg
cacaagacccgccgctggctgaaccagccgccgaccgatcggcagctcgccttcctgcca
tccgaatgtcggcaggacttcgggctcacccgctatcaggcctcggcgctgattaccttt
cgcttcaaccgcgatgcgatccgctccctcgtcttcggtgccgcagaagccgctcccgag
gcagtcatcgggagggcggcatga
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