Phocaeicola vulgatus: BVU_2436
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Entry
BVU_2436 CDS
T00546
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BVU_2436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_2436
Enzymes [BR:
bvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BVU_2436
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BVU_2436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABR40094
UniProt:
A6L330
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All DBs
Position
3130956..3131792
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AA seq
278 aa
AA seq
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MKKIGAHVSVSGGVEMAPVNALGIGADAFALFTKNQRQWVAKPLSVESVTLFKENCEKEG
FDARYVLPHDSYLINLGHPDEEGLEKSRAAFLDEMQRCELLGLKMLNFHPGSHLNKISIE
KCLDRIAESVNMTLDKTTGVTAVIENTAGQGSNVGNEFWHLRYIIDKVEDKSRVGVCLDT
CHTYTAGYDIVNEYDRVFTEFDEVVGRNYLCAIHLNDSKKPLGSRVDRHDSIGKGLIGID
FFRRFMQDSRFDDMPVILETPDDTIWRDEIKMLRSFES
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataggtgcacatgtatccgtaagcgggggcgtggaaatggcccccgttaat
gcattagggataggagcggacgcattcgctctttttacaaagaatcagaggcaatgggtt
gcaaaacctttgtctgtcgagagtgttactctgtttaaagaaaactgcgagaaagaaggt
tttgatgcccggtatgttcttcctcatgacagttatctgataaatttgggacatcctgac
gaggaagggctggagaagagtcgtgcagcatttttggacgaaatgcagcgttgcgagctt
ttaggattgaaaatgctgaattttcatcccggaagtcatttgaataagatatccatagag
aagtgtctggacaggattgccgagtctgtcaatatgactttggataaaacgaccggtgtg
actgctgtgattgagaatacagccggacagggaagtaatgtgggaaatgaattctggcat
ttgagatatattatagataaggtggaggataaatctcgtgtgggagtttgcctggatact
tgccatacctataccgccggttatgatattgtgaatgaatatgaccgggtctttaccgag
tttgatgaggtagtggggagaaactatttgtgtgccattcacttgaatgactcaaagaaa
ccattgggtagccgggtagaccgtcatgacagtatcggaaaggggctgattggtattgat
ttcttccgccgctttatgcaggattcccgttttgacgatatgcccgttattcttgaaact
cccgatgacaccatttggcgggacgagattaaaatgcttcgcagctttgagtcatag
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