Brevundimonas vancanneytii: NCTC9239_00596
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Entry
NCTC9239_00596 CDS
T06708
Symbol
hupB
Name
(GenBank) DNA-binding protein HRm
KO
K03530
DNA-binding protein HU-beta
Organism
bvy
Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvy03032
]
NCTC9239_00596 (hupB)
03036 Chromosome and associated proteins [BR:
bvy03036
]
NCTC9239_00596 (hupB)
03400 DNA repair and recombination proteins [BR:
bvy03400
]
NCTC9239_00596 (hupB)
DNA replication proteins [BR:
bvy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC9239_00596 (hupB)
Chromosome and associated proteins [BR:
bvy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC9239_00596 (hupB)
DNA repair and recombination proteins [BR:
bvy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC9239_00596 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
VTO12092
UniProt:
A0A4P1JVY4
LinkDB
All DBs
Position
1:complement(591500..591778)
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AA seq
92 aa
AA seq
DB search
MTTQAELIAAVAKDAGVSQADAGKVLTAIVENIHKSLKSGGDVRISNLGVFDTAERAERE
GRNPATGATIKIPASKAVRFRVSKPLKDAVNG
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcaagctgaactgatcgccgccgtcgccaaggacgcgggcgtttcgcaagct
gacgccggcaaggtgctgaccgccattgtcgaaaacatccacaagtcgctgaagtcgggc
ggcgacgtccgcatctcgaacctgggcgtgttcgacaccgccgagcgcgccgagcgcgaa
ggccgcaacccggccaccggcgccacgatcaagatcccggcctcgaaggccgtgcgcttc
cgcgtgtcgaagccgctgaaggacgccgtcaacggctaa
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