KEGG   Brevundimonas vancanneytii: NCTC9239_00596
Entry
NCTC9239_00596    CDS       T06708                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HRm
  KO
K03530  DNA-binding protein HU-beta
Organism
bvy  Brevundimonas vancanneytii
Brite
KEGG Orthology (KO) [BR:bvy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvy03032]
    NCTC9239_00596 (hupB)
   03036 Chromosome and associated proteins [BR:bvy03036]
    NCTC9239_00596 (hupB)
   03400 DNA repair and recombination proteins [BR:bvy03400]
    NCTC9239_00596 (hupB)
DNA replication proteins [BR:bvy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    NCTC9239_00596 (hupB)
Chromosome and associated proteins [BR:bvy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    NCTC9239_00596 (hupB)
DNA repair and recombination proteins [BR:bvy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      NCTC9239_00596 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: VTO12092
UniProt: A0A4P1JVY4
LinkDB
Position
1:complement(591500..591778)
AA seq 92 aa
MTTQAELIAAVAKDAGVSQADAGKVLTAIVENIHKSLKSGGDVRISNLGVFDTAERAERE
GRNPATGATIKIPASKAVRFRVSKPLKDAVNG
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaccactcaagctgaactgatcgccgccgtcgccaaggacgcgggcgtttcgcaagct
gacgccggcaaggtgctgaccgccattgtcgaaaacatccacaagtcgctgaagtcgggc
ggcgacgtccgcatctcgaacctgggcgtgttcgacaccgccgagcgcgccgagcgcgaa
ggccgcaacccggccaccggcgccacgatcaagatcccggcctcgaaggccgtgcgcttc
cgcgtgtcgaagccgctgaaggacgccgtcaacggctaa

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