Brevundimonas vancanneytii: NCTC9239_03153
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Entry
NCTC9239_03153 CDS
T06708
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bvy
Brevundimonas vancanneytii
Pathway
bvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC9239_03153 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvy03019
]
NCTC9239_03153 (pnp)
03016 Transfer RNA biogenesis [BR:
bvy03016
]
NCTC9239_03153 (pnp)
Enzymes [BR:
bvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC9239_03153 (pnp)
Messenger RNA biogenesis [BR:
bvy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC9239_03153 (pnp)
Transfer RNA biogenesis [BR:
bvy03016
]
Prokaryotic type
tRNA degradation factors
NCTC9239_03153 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
GYD
PHB_acc_N
S1_2
Motif
Other DBs
NCBI-ProteinID:
VTO19542
UniProt:
A0A4P1KGQ8
LinkDB
All DBs
Position
1:complement(3061431..3063659)
Genome browser
AA seq
742 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRQPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVIVTVLQH
DLENDPDILGMVAASAALTISGVPFMGPIGAARVGMIDGELVLNPAIDQMGESALDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVASIKALVGEEIKAAYAHPGKYDRRSGVDAAKKKAAEALVKTDEKPEGVDSSKFSAAFK
ECEADVLRRDIIENSHRVDGRALDKVRAIVSEVGVLPRTHGSSLFTRGETQALVVATLGT
GEDEQYIDSLTGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPSK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLARPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMQQALTQASAGRLHILDEM
SKAMEAPRAELGEFAPKIESIKIAVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKI
AANEQEKIEAAKAWIQSIASEPEVGTIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQETGEDITDKINAERAERGEAPLS
EDTGGRPKGDRNGGDRGRRRRD
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggacgccccttgaccctcgagacg
ggccgcatcgcccgtcaggccgacggcgccgtgctggcgacctacggcgagaccgtggtc
ctggccaccgtcgtctacggccgtcagcccaagccgggcctggatttcttccccctgacg
gtcaactaccaggaaaagacctttgcggccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgcccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcatcgtcaccgtgctgcagcac
gaccttgagaacgatcccgacatcctgggcatggtcgccgcctcggccgctctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcatgatcgacggcgag
ctggtgctgaacccggccatcgaccagatgggcgaaagcgccctggacctggtcgtcgcg
ggcacgcaggacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcacgcgggcatgcagccggtgatcgacgccatcatc
gatctggccgagcacgccgccaaggagccgttcgacttccaggccgaagaccactcggac
gtggtcgcctcgatcaaggcgctggtcggcgaagagatcaaggccgcctacgcccatccg
ggcaagtatgaccgccgctcgggcgtcgacgccgccaagaagaaggccgccgaggccctg
gtgaagaccgacgagaagccggaaggcgtcgactcgtccaagttctcggccgcgttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacagccaccgcgtcgacggc
cgcgccctggacaaggtccgcgccatcgtctcggaagtcggcgtcctgccgcgcacccac
ggttcgtcgctgttcacgcgcggcgaaacccaggccctggtcgtcgccaccctgggcacc
ggcgaggacgagcagtacatcgacagcctgacgggcacctacaaagagtccttcctgctg
cactacaacttcccgccctattcggtcggtgaagcgggccgcatgggctcgccgggccgt
cgcgaaatcggccacggcaagctggcctggcgcgccatccgcccgatgctgccgtcgaag
gaagacttcccctacaccatccgtctggtgtcggagatcaccgagtccaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggccctgatggacgccggcgtgccgctggcg
cgtccggtctcgggcatcgccatgggtctgatcctggagccgtcgggtgagttcgccatc
ctgtcggacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtcgcgggc
acctcggaaggcatcaccagccttcagatggacatcaaggtcgccggcatcaccaaggag
atcatgcagcaggccctgacgcaggcttcggccggtcgtctgcacatcctcgacgaaatg
tcgaaggcgatggaggctccccgcgccgagctgggcgagttcgcgcccaagatcgaatcc
atcaagatcgcggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgtggaaaagaccggcgccaagatcgacatcggcgacgacggcaccatcaagatc
gccgccaacgagcaagagaagatcgaagctgccaaggcctggatccaatccatcgcctcg
gagccggaagtcggcaccatctacaccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgccctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaagaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggaaaccggc
gaggacatcaccgacaagatcaacgccgagcgcgctgaacgcggtgaagctccgctgtcg
gaagacaccggcggccgtcccaagggcgaccgtaacggcggcgaccgcggccgtcgccgt
cgcgactaa
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