Bacillus wiedmannii: CT694_29275
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Entry
CT694_29275 CDS
T05831
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
bwd
Bacillus wiedmannii
Pathway
bwd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT694_29275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwd03019
]
CT694_29275
03009 Ribosome biogenesis [BR:
bwd03009
]
CT694_29275
Messenger RNA biogenesis [BR:
bwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CT694_29275
Ribosome biogenesis [BR:
bwd03009
]
Prokaryotic type
rRNA helicases
CT694_29275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
RHSP
Motif
Other DBs
NCBI-ProteinID:
AZJ23514
LinkDB
All DBs
Position
complement(5477634..5479079)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGI
PLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELK
QKTHIVVGTPGRVLDHIEKGTLSLDRLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMT
MLFSATLPEDIEKLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTMIE
NPDSCIIFCRTQENVDHVYRQLKRVNYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATD
VAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNNGKAITFITPYENRFLEEIEEY
IGFEIPKELAPSKEEVIKEKAVFEEKIYAKPIIKKDKNADLNKGIMKLYFNGGKKKKIRA
VDFVGTIAKIQGVSADDIGIITIQDNVSYVEILNGKGPLVLKVMRNTTIKGKQLKVHEAI
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagctttagtaattatgcattaagtaaagaagtaagacgagcacttact
ggtttaggatatgagcatccgacagaagtgcaaggagaggttattccagttgcattgcaa
aagaaggatcttgttgtaaagtcgcaaacgggaagtggaaaaacggcttcgttcggaata
ccactttgtgaaatggtagagtgggaagagaataaaccacaagcattagttttaacacca
acgagggaacttgctgttcaagtgaaagaagatattacgaatatagggcgattcaaaaga
attaaagctgctgcaatttatggtaaatctccatttgcacgtcaaaaattagagttaaag
caaaagacgcatattgtagtggggaccccaggacgtgtgttggatcatattgaaaaaggg
accctttctttagatcgattgaaatatttagtgattgatgaagcagatgaaatgctaaat
atgggctttatcgatcaagtagaggcaattattgatgaattacctacaaaaagaatgaca
atgctattttcagcaaccctaccggaagatattgaaaagttatcccgtacatatatgaat
gcaccaactcatattgaaattaaagcagctgggattacaacagataaaattgaacatacc
ctttttgaagtaagggaagaagagaagctttcacttcttaaggatgtaactatgattgaa
aatccagacagttgcattattttttgtcgtacacaagaaaacgtagaccatgtatataga
cagctaaaacgagttaattatccttgtgacaaaatacacggtggtatggtgcaggaagat
cgttttgaagttatggatgattttagaaaaggaaagttccgttatttagtagcaactgat
gtagctgcgagaggaattgatattgataatattacacatgttattaattacgatattcca
ttagaaaaagaaagctatgtacaccgtactggaaggacgggacgagctggtaataatgga
aaagctattacatttataacgccttatgaaaatagatttttagaagagattgaggaatat
atcggatttgaaattccaaaggaactggcaccttcaaaagaagaagttataaaagagaaa
gcagtatttgaagaaaaaatatatgctaaaccaattataaagaaagataaaaatgcagac
ctaaacaaaggaattatgaaattgtactttaatggcggaaagaaaaagaaaattagggcg
gtagatttcgttggtacaattgctaaaattcaaggtgtttctgctgatgatataggtatt
attacaatacaagataatgtttcgtatgttgaaatattaaacggaaaaggaccacttgtt
ttaaaggttatgagaaatacaacgataaaaggtaaacaattaaaagttcatgaggcaatt
aagtaa
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