Paraburkholderia xenovorans LB400: DR64_3178
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Entry
DR64_3178 CDS
T03290
Name
(GenBank) exonuclease family protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bxb
Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bxb03019
]
DR64_3178
03009 Ribosome biogenesis [BR:
bxb03009
]
DR64_3178
Messenger RNA biogenesis [BR:
bxb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DR64_3178
Ribosome biogenesis [BR:
bxb03009
]
Eukaryotic type
Pre-60S particles
RNases
DR64_3178
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIP31189
UniProt:
Q13VF8
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All DBs
Position
1:3475597..3476220
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AA seq
207 aa
AA seq
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MTDILASTEQPPLVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAI
HQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNS
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPSAPDAANGAEKAAE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatcctcgcatccaccgaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagcccgactccgaccgcatcatcgaaatc
gcggtggtggtgacgaactcgacgctcgacagaatggtagaaggtccggtgctggcgatt
catcagagcgacgagacgctcgccggaatggatcagtggaatcagaacacgcatggccgc
tcgggcctgatcgaccgcgtgaaggcctccacggtgagcgaggccgacgccaccgaacag
atccgcgatttcctgagcgtctacgtgccgccgggcaaatcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccggagctggagcgcttcttccat
taccgcaatctcgacgtcagcacgctcaaggaactgtgccgccgctggcagccggccatc
tacaaaggcttccagaagcgcgcgatgcacacggcgctcgccgacatccacgagtcgatc
gacgaactgaagtactaccgcgagcacttcctgatcccgtcggcgccggacgccgccaat
ggtgcggaaaaagccgcggaataa
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