KEGG   Paraburkholderia xenovorans LB400: DR64_3178
Entry
DR64_3178         CDS       T03290                                 
Name
(GenBank) exonuclease family protein
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
bxb  Paraburkholderia xenovorans LB400
Brite
KEGG Orthology (KO) [BR:bxb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bxb03019]
    DR64_3178
   03009 Ribosome biogenesis [BR:bxb03009]
    DR64_3178
Messenger RNA biogenesis [BR:bxb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DR64_3178
Ribosome biogenesis [BR:bxb03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    DR64_3178
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AIP31189
UniProt: Q13VF8
LinkDB
Position
1:3475597..3476220
AA seq 207 aa
MTDILASTEQPPLVRSDMNLVWLDMEMTGLEPDSDRIIEIAVVVTNSTLDRMVEGPVLAI
HQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCGNS
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPSAPDAANGAEKAAE
NT seq 624 nt   +upstreamnt  +downstreamnt
atgactgacatcctcgcatccaccgaacagccgccgctcgtgcgcagcgacatgaatctc
gtctggctggacatggaaatgaccgggctcgagcccgactccgaccgcatcatcgaaatc
gcggtggtggtgacgaactcgacgctcgacagaatggtagaaggtccggtgctggcgatt
catcagagcgacgagacgctcgccggaatggatcagtggaatcagaacacgcatggccgc
tcgggcctgatcgaccgcgtgaaggcctccacggtgagcgaggccgacgccaccgaacag
atccgcgatttcctgagcgtctacgtgccgccgggcaaatcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgccggagctggagcgcttcttccat
taccgcaatctcgacgtcagcacgctcaaggaactgtgccgccgctggcagccggccatc
tacaaaggcttccagaagcgcgcgatgcacacggcgctcgccgacatccacgagtcgatc
gacgaactgaagtactaccgcgagcacttcctgatcccgtcggcgccggacgccgccaat
ggtgcggaaaaagccgcggaataa

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