Bacillus amyloliquefaciens XH7: BAXH7_02940
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Entry
BAXH7_02940 CDS
T01836
Symbol
dnaE
Name
(GenBank) DNA polymerase III (alpha subunit)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bxh
Bacillus amyloliquefaciens XH7
Pathway
bxh03030
DNA replication
bxh03430
Mismatch repair
bxh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BAXH7_02940 (dnaE)
03430 Mismatch repair
BAXH7_02940 (dnaE)
03440 Homologous recombination
BAXH7_02940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxh03032
]
BAXH7_02940 (dnaE)
03400 DNA repair and recombination proteins [BR:
bxh03400
]
BAXH7_02940 (dnaE)
Enzymes [BR:
bxh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BAXH7_02940 (dnaE)
DNA replication proteins [BR:
bxh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BAXH7_02940 (dnaE)
DNA repair and recombination proteins [BR:
bxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BAXH7_02940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEK90064
LinkDB
All DBs
Position
complement(2746795..2750133)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVRSGYSLLNSAASVKEIVTQAKELGYSSLALTDENVMYGAIEFYKACKSHGIK
PIIGLTASIYTDETELEARPLVLLAETNTGYQNLLKISSALQSIAKGGMKRKWMKSYHEG
LIAITPGENGYIESLLQAGEFEEAVRVAEGFRELFGEGRFYLGYQPFKGHETLSEEILRL
SAETEIAVCAAGDVRYIKKEDQDAYRCLCAIKAGEKWEDQSGDLPDLYLRPPEEMENIYM
KNPEAVKAAARVAQQCQVDVSLGQTQLPSFPAPDGKSADDYLAEVCHEGLRLRFGTPDER
AVRRLEYELDVIRRMKFSDYFLIVWDFMKYAHEKGIVTGPGRGSAAGSLVAYSLFITDVD
PLKHSLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQNKYGSMHVAQIITFGTLAAKA
ALRDTGRVFGISPKEADQLARLIPSKPGMTLEEARRQSAQLNRRLSESAVLHKVFQIARK
IEGLPRHTSTHAAGVVLSKEPLSEVVPLQEGHDGVYLTQYAMDHLEDLGLLKMDFLGLRN
LTLIESIKTMIEKETNTKIDFSEISYQDEKTFSLLSNGDTTGIFQLESSGMRNVLKRLKP
SRLEDIVAVNALYRPGPMENIPLFIDRKHGRARVEVPHEDVRNILSDTYGVIVYQEQIMM
IASRMAGFSLGEADLLRRAVSKKQKDILDRERSHFVEGCLKKEYSVVTANEVYDLIVKFA
NYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSVIGNEDKISQYLHEAKGSGLQVL
PPSVNKSGFPFAPENGAVRYSLRAIKNVGVSAVKDIYKARTHKPFEDLFDFCFRVPAKSV
NRKTIEALIFSGAMDEFNQNRAALLASVDVALEHAELFRADDDQMGLFLEESFSIKPKYV
EAEEFPLVDKLRFEKEALGVYFSSHPLSAFRNLLKKRGAQAIATALQMPKGQLSIGALLA
GIKTIRTKTGQHMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKMEERQEKI
QFIMSSASLLEQTEADRAPSVYIKIEGSRHNQEFLEKMKRILLEHKGETGVYLYYEKDKQ
TIRLPDTFHIQADHQALYRLKELLGRENVVLK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttttgttcaccttcaagtacgtagcggctacagcctgttaaacagcgccgcttct
gtaaaagagattgttacacaagcgaaggagctcggatattcttcattggcgctcacggac
gaaaatgtgatgtacggcgccattgagttttataaagcatgcaagtcacacggaataaag
ccgattatcggtctgacggcttcaatatacacggacgaaactgagcttgaagcacgcccg
cttgttcttttggcggagacaaacaccggatatcagaacctgctgaaaatctcaagtgcg
ctgcaatccatagcaaagggcggcatgaagcgaaaatggatgaagagctatcatgaaggg
ctgatcgccattacgcccggtgaaaacgggtacattgaaagcctgcttcaagcaggagag
tttgaagaagcggttcgggttgccgaaggattccgggaattgttcggagaaggccgtttt
tatttagggtaccagccgtttaaaggacatgagacattatcagaagaaattctccgcctg
tcagccgagacggaaatcgctgtctgcgcggcgggggatgtccgttatatcaagaaagaa
gatcaagatgcgtaccgctgtctgtgcgccattaaagccggggagaaatgggaggatcag
agcggggacctgccggacttatacttgaggccgcctgaagaaatggaaaatatttatatg
aagaatccggaagcggtcaaagcagccgcacgtgtcgctcagcaatgccaagtcgatgtc
agcctcggacagacacagcttccgtctttcccggcgccggacggcaaatcagctgatgac
tatttggcggaagtctgtcatgaggggcttcgtctccgtttcggcactcctgatgagcgt
gctgtccgccgtcttgaatatgagctggatgtcatcaggcgcatgaaattcagtgattac
tttctcatcgtatgggactttatgaagtacgcgcatgaaaagggcattgtgacaggtccg
ggaagggggtctgcggcaggctcgcttgtcgcttactcccttttcattacagacgtggac
ccgcttaaacattctttgttattcgagaggtttcttaatcccgagcggatcagcatgccc
gatattgatatcgatttccctgatacgagaagggatgaggtcattcagtatgtgcaaaat
aagtatgggagcatgcacgtcgcccagattatcaccttcggaacattggccgcaaaggcg
gcgttaagggataccggcagagtgttcggaatcagcccgaaagaagccgaccagcttgcc
cgcctgattccgtctaagccgggaatgacgcttgaggaggcgagacggcagtccgctcag
ctgaacaggcggctgtctgaatccgccgttcttcataaagtgtttcagatcgcaaggaaa
atcgaaggtcttccgaggcatacgtctacacacgcggccggcgttgttctcagcaaagag
ccgctttctgaagttgtccctctgcaggaagggcatgacggcgtgtatttaacgcagtat
gcgatggatcacttggaagatctcggccttttgaaaatggactttttaggtttgcgcaac
ctgacgcttatcgaatccattaagacgatgattgaaaaagagacaaatacgaaaattgat
ttttccgagatttcttatcaggatgaaaaaacgttctcgctattatcaaatggcgatacg
acggggatttttcagctggaatcatcaggaatgaggaatgtgctgaagcgtctgaagccg
tcaaggcttgaagacattgtcgcggtaaacgcgctttacaggccggggccgatggaaaat
attccgctatttatcgaccggaagcacgggcgggcgcgtgtggaagtcccgcacgaggat
gtaagaaatattctcagtgacacgtacggcgtcatcgtctatcaagagcagattatgatg
atcgcctcgcgcatggcaggtttttcattaggtgaagcggatctgctcagacgggctgtc
agcaaaaagcaaaaggacattttggacagagagcgaagccattttgttgaagggtgctta
aaaaaggagtattctgtagtcactgcaaacgaggtctacgatctgattgtcaaattcgct
aactacggattcaacagaagccatgctgtcgcatacagcatgatcggctatcagctcgcc
tatttaaaagctcactatcctttatattttatgtgcgggcttttgacgagcgtcatcggc
aatgaggacaaaatatcgcaatatctgcacgaagcaaaggggagcgggctccaagtcctt
ccgccgtctgtcaataagagcggttttccgtttgcacctgaaaacggcgccgtcagatac
agtttgcgggccataaaaaacgtaggcgtctcggcagtgaaagatatttataaagcaaga
acacataaaccgttcgaggatcttttcgatttctgctttcgcgttcctgccaaaagcgtt
aatcggaaaacaatcgaagcccttatattttctggcgccatggacgaattcaatcaaaat
cgcgccgccttgctggcctccgttgatgtggctttagagcacgctgagctttttcgtgca
gacgatgaccaaatgggattgtttttggaagaatcgttctccattaagccaaaatatgta
gaggcagaggaatttccgctcgtggacaagcttcggtttgaaaaagaagctctcggtgtt
tatttctcaagccatcctttgtcagctttcaggaatctcttgaaaaaacggggggcgcaa
gcgatcgcaacagcgctgcagatgccgaaaggacagctgtcaatcggcgctttgctcgca
ggcatcaaaacgattcggacaaagacaggtcagcatatggcgtttctcacattaagcgac
gaaacgggagaaatggaagccgtcgtgtttcctgaccaatatagaaggctgtctccgctg
ttaaaagaaggcgcgcttttattcgcgtccggaaaaatggaagagcggcaggagaagata
caatttattatgtcatccgcctctctccttgagcagacggaggcagacagagcgccgtct
gtttacatcaaaatcgaaggcagccggcacaatcaggagtttctggaaaagatgaagcgt
attttactggagcataaaggggaaaccggcgtttatctttattacgaaaaggacaagcag
accatcaggctgcccgatacttttcatattcaggccgaccatcaggcgttataccgttta
aaagagctgctgggccgcgaaaacgtcgtgttaaaatag
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