Caballeronia sp. SBC2: SBC2_15390
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Entry
SBC2_15390 CDS
T06459
Symbol
glgX_1
Name
(GenBank) Glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00500
Starch and sucrose metabolism
caba01100
Metabolic pathways
caba01110
Biosynthesis of secondary metabolites
Module
caba_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SBC2_15390 (glgX_1)
Enzymes [BR:
caba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SBC2_15390 (glgX_1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Isoamylase_C
Glyco_hydro_31_2nd
DUF3459
ISOA1-3_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
QIE23515
LinkDB
All DBs
Position
1705665..1707863
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AA seq
732 aa
AA seq
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MAHDIRIAEGSPFPLGATWDGEGVNFALFTAHATKVELCLFDDTGKNELERIELPEYTDE
VFHVYLFGLKPGVVYGYRVHGPYEPENGHRFNPNKLLLDPYAKAHVGELTWDPAVFGYTL
DADGDDLTFDERDSAPFVQKCQVVDQSFSWVHPTRVRVPWEQTIFYETHVRGYTKRHPAV
PEHARGTFEGLGTKEVIEHIKSLGVTSVELLPIQAFVDDSHLTEKGLTNYWGYNTIGFFA
ADPRFFAQGPGAVAELKQMIDRFHEAGLEVILDVVYNHTAEGNERGPTLSFKGIDNASYY
RLPEDKRYYINDTGTGNTLNLSHPRVLQMVTDSLRYWVTEMNVDGFRFDLATILGRETYG
FDEGGGFLDSCRQDPILSSVKLIAEPWDCGPGGYQVGGFPPGWAEWNDKYRDTVREFWKG
EEGVAAELATRITGSGDKFNHRGRRPWASVNFITAHDGFTLNDLVSYNEKHNEANGEDNN
DGSSDNRSWNCGAEGPTDDPEIRALRERQKRNMLATLLFSQGTPMILAGDEFGRTQQGNN
NAYCQDDDISWVNWDIDDDGRALNDFVRKLTTLRHTLPVLRRGRFLTGEYHEDLQLSDVK
WLSPSGEELTPEQWDDPSMRCFGLVIDGRAQATGIRRPASDATLLLVINAHHDVVDLTLP
EIPGSDQWSCLIDTNAPIREELEDFDSGAIYQVTGRSLLLFALHARGATKRIFKRLEEAL
TDEVEPEGGNAE
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgatatccgcattgccgaaggctcgccgtttcctctgggcgcgacctgggat
ggcgagggcgtcaatttcgccttgttcaccgcgcacgccacgaaagtcgaactatgcctc
ttcgatgacaccggcaagaacgaactcgaacgcatcgaattgcctgaatacaccgatgaa
gttttccacgtctatctattcggtctgaagccgggtgtggtctacgggtaccgcgtgcat
ggtccgtatgagccggagaacgggcatcgcttcaatccgaacaagctgttgctcgaccct
tacgcgaaggcgcacgtgggcgagctgacgtgggacccagcggtgttcggttacacgctg
gatgcggatggcgacgacctcacgttcgacgagcgcgacagcgcgccgttcgtgcaaaag
tgccaggtggtcgaccagagcttttcgtgggtccacccaacgcgcgttcgcgtgccttgg
gaacagaccatcttctacgaaacccacgtgcgtggttatacgaaacgtcacccggccgta
cctgaacatgcgcgtggcacgttcgagggattgggcacgaaggaagtgattgagcacatc
aagagtttgggggtgacatcggttgaattgctgcctattcaagcgttcgtggacgacagt
cacctcaccgaaaaaggtctcaccaactactggggctacaacacaatcggcttcttcgcc
gccgatccgcgtttctttgcgcaaggcccgggggcggtcgcggaactcaagcaaatgatt
gaccgcttccacgaagccggcctcgaggtcattctcgatgtggtctacaaccacaccgcc
gaaggcaacgagcgagggccgacgttgtcgttcaagggtatcgacaacgcttcgtattat
cggctgcccgaagacaagcgttattacatcaacgataccggcacgggcaacacgctcaac
ctgtcgcatccgcgcgtgctgcagatggtcaccgacagcctgcgctactgggtcaccgag
atgaacgtggacggtttccgtttcgatctggcgactatcctcggccgcgagacctacggt
ttcgacgaaggcggcgggttcctcgacagttgccgccaggacccgattctctccagcgtg
aagctgatcgccgagccttgggattgcggccccggcggatatcaggtcggtggttttccg
ccgggctgggcggaatggaacgacaaatatcgcgataccgtgcgcgagttctggaagggc
gaagagggcgtggcggcagagttggccacgcgtattaccggttccggcgataaattcaac
catcgcggccggcgtccctgggcgagcgtgaatttcatcaccgcgcacgatggtttcacg
ctgaacgacctcgtctcatacaacgagaagcacaatgaggcgaacggcgaggacaacaac
gacggcagctcggacaaccgctcgtggaattgcggcgcggaaggcccgaccgacgaccct
gaaatccgtgccctgcgtgagcgccagaaacgcaacatgctggccacgctgctgttctct
caaggcacgccaatgatcttggccggcgacgaattcggccgcacccaacaaggcaacaac
aacgcgtattgccaggacgacgacatcagttgggtcaactgggatatcgacgacgacggc
cgcgcgctgaacgacttcgtgcgcaagctcacgaccttgcggcacacgttgccggtattg
cgtcgcggacgtttcctgacgggtgagtatcatgaagacctgcaactctccgacgtgaaa
tggctgagcccctcaggcgaggagctgacgccggaacaatgggacgacccgtcgatgcgc
tgcttcggcctcgtgatcgacggccgcgctcaagcaacgggcattcgccgcccggcgtcc
gatgccacgctgctgctcgtgatcaacgcgcatcacgatgtggtcgacctgacgttgccc
gagattcccggaagcgaccagtggagttgcctgatcgacaccaatgcgccaattcgcgaa
gagctggaggacttcgattcgggcgcgatctatcaggtaaccgggcgatcgctattgctg
ttcgcgcttcatgcgcgcggcgcgaccaagcggattttcaagcgcctggaagaagcactc
accgatgaggtggagccggagggtggtaacgcggagtaa
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