Caballeronia sp. SBC2: SBC2_27010
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Entry
SBC2_27010 CDS
T06459
Name
(GenBank) Putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba00630
Glyoxylate and dicarboxylate metabolism
caba00680
Methane metabolism
caba01100
Metabolic pathways
caba01120
Microbial metabolism in diverse environments
caba01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SBC2_27010
09102 Energy metabolism
00680 Methane metabolism
SBC2_27010
Enzymes [BR:
caba01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SBC2_27010
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_21
Fer4
Fer4_10
Fer4_6
Fer4_9
Fer4_2
Fer4_15
Fer4_8
Fer4_4
Fer4_16
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
QIE24652
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Position
2976472..2979402
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AA seq
976 aa
AA seq
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MSNSSCGSGNCACKTKLRDPFDDTDYGTPLRHADIDVTLDIDGTSVTVPAGTSVMRAAIE
AGVNVPKLCATDSLEPFGSCRLCLVEIEGKRGYPASCTTPVEAGMKVRTQTNKLQSLRKN
VMELYISDHPLDCLTCPANGDCELQDMAGVVGLREVRYGYEGANHLKDKKDESNPYFTYD
ASKCIVCNRCVRACEETQGTFALTIAGRGFESRVAASENQPFMESECVSCGACVAACPTA
TLQEKTVIMLGQPEHSVVTTCAYCGVGCSLKAEMKGSEVVRMVPNKNGQANDGHACVKGR
FAWGYATHKDRITKPMIRAKITDPWREVSWEEALSYAASEFRRIQDKHGVDSIGGITSSR
CTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKATLGESAGTQTFASVEKADVIV
VIGANPTDGHPVFASRLKRRVREGAQLIVVDPRRIDIVNTPHVKASHHLALRPGTNVAMI
NALAHTIVTEGLVKEDFVAERCEARAFQQWRDFIALEENSPEAMEAITGVPAQSVREAAR
IYANAGNGAIYYGLGVTEHAQGSTMVMGIANLAMATGNVGREGVGVNPLRGQNNVQGSCD
MGSFPHELPGYRHIGDAAVRSLFEEAWNVKLQSEPGLRIPNMFDAAVHGSFLGLYCQGED
IVQSDPNTQHVAKALSSMECIVVQDIFLNETAKYAHVFLPGSSFLEKDGTFTNAERRISR
VRKVMPPLPGLADWEVTIKLARALGYEMNYTHPSQIMDEIARLTPTFTGVSYKRLDELGS
IQWPCNEQAPDGTPTMHIDEFVRGKGHFVITKFIATPEKVTRKFPLLLTTGRILSQYNVG
AQTRRTENSRWHEEDRLEIHPHDAEDRGIKADDWVGIESRAGQTVLRAKITERMQPGVVY
TTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVEQPSQWQKDYSRFNTQQLEFLEL
RDSTVATEATVTSSGK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactcatcctgcggttccggcaattgcgcgtgcaagacgaaactgcgcgacccc
ttcgacgataccgactacggcacgccgctgcgccatgcggatatcgacgtgacgctcgat
atcgacggtacctcggtgacggtgccggcgggaacgtcggtgatgcgtgcggcgatcgaa
gccggcgtcaacgttcctaaactctgcgcgacggattcgcttgagccgttcggttcgtgc
cgtctgtgcctggttgaaattgaaggcaagcgcggttatccggcgtcgtgcaccacgccc
gtggaagccgggatgaaagtgcgaacgcagacgaacaagctgcaatcgctgcgcaagaac
gtgatggagttgtatatctccgatcacccgctcgactgtctcacctgccccgccaacggc
gactgcgagttgcaggacatggcgggcgtggtcggcttgcgcgaagttcgctacggctac
gaaggcgcgaatcacctgaaggacaagaaggacgaatcgaatccatatttcacgtacgac
gcttcgaagtgcattgtctgcaatcgttgcgtgcgcgcgtgcgaggaaacacaaggaaca
ttcgcgctgactatcgcgggacgtggtttcgaatcgcgcgtggccgcgagcgaaaaccag
ccgttcatggaatcggagtgcgtgtcgtgcggcgcgtgcgtggccgcgtgcccgactgcg
acgctgcaggaaaagaccgtgatcatgctcggccagcccgagcattcggttgtgacgacg
tgcgcgtattgcggcgtcggctgctcgttaaaagccgagatgaaaggcagcgaagtcgta
cgcatggtgccgaacaagaacggccaggcaaacgatggtcacgcgtgcgtaaaaggccgc
tttgcatggggctacgccacgcacaaggaccgcatcaccaagccgatgatccgcgccaag
attactgatccatggcgagaggtgagctgggaagaagcgctctcgtacgctgccagcgaa
ttccgtcgcatccaggacaagcatggcgtggattcgattggcgggattacatcgtcgaga
tgcacgaacgaggaaacctacctcgtgcagaaactcgtgcgcgcggcgttcggcaataac
aatgtcgatacctgtgcccgtgtttgtcactcgcctaccggttatggcctgaaggctacg
ctcggtgaatcggcgggaacgcagaccttcgcgtccgtcgaaaaggcggatgtgattgta
gtgatcggcgcgaatccgaccgatggccaccccgtgtttgcatcgcggctcaagcgccgg
gtgcgtgaaggcgcgcagctgattgtggtggacccgcgccgtatcgatatcgtgaatacg
ccgcacgtgaaggcatcgcatcatctggcattgcggccgggcacgaacgtcgccatgatc
aacgcgctcgcgcacacgatcgtgaccgaaggactggtgaaggaagatttcgtcgccgag
cgctgcgaggcgcgtgcgttccagcaatggcgcgacttcatcgccctcgaagagaactcg
cccgaagcaatggaagccatcaccggcgtgcccgcgcaatcggtacgtgaagccgcgcgc
atctatgcgaatgccggcaacggtgcgatctactacggcctgggcgtgacggaacatgcg
caaggctcgacgatggtcatgggtatcgcgaatctcgcgatggcaacgggcaacgtgggc
cgtgaaggtgtgggcgtgaatccgctgcgtggccagaacaacgtgcagggttcgtgcgac
atgggttcgttcccgcacgagctgccgggttatcgacatatcggcgacgcggcagtgcgc
tcattgttcgaagaagcatggaacgtgaagctgcaatcggagccgggcctgcggattccg
aacatgttcgatgccgcggttcatggcagcttccttggcctttactgccagggcgaggac
attgttcaatccgatccgaatacgcaacacgtggcgaaggcgttgtcgtcgatggaatgc
atcgttgtgcaggacatcttcctgaacgagacggccaagtacgcgcatgtgttcctgccg
ggttcgtcattcctcgaaaaggatggcacgttcacgaatgcagagcgccggatctcgcgt
gttcgcaaggtcatgccgccactgccaggtctggccgactgggaagtgacgatcaagctc
gcccgcgcgctcggttatgaaatgaactacacgcatccgtcgcagatcatggacgagatc
gcaaggctcacacccacgttcaccggcgtgtcgtacaagcgtctcgatgaactcggcagc
attcagtggccgtgcaacgagcaagcgccggacggcacgccgacgatgcacatcgacgaa
ttcgtgcgcggcaagggccacttcgtaattacgaagttcatcgcgacgccggagaaggtg
acgcgcaagttcccgctgctgctcaccacgggccgcatcctgtcgcagtacaacgtgggc
gcccagacgcggcgcacggagaattcgcgctggcatgaagaggatcggctggagattcat
ccgcatgacgccgaagaccgcggcatcaaggcggacgattgggtcgggatcgaatcgcgt
gccgggcagactgtgctgcgcgcgaagatcaccgagcggatgcagccgggcgtggtgtac
acgacgttccacttcccggagtccggcgcaaacgtgatcacgaccgactcctccgattgg
gccacgaattgtcccgagtacaaagtgacggcggtgcaggtcatgccagtggaacagccg
tcgcaatggcaaaaggattattcgcgcttcaatacgcagcagttggagtttcttgagttg
cgtgattcaacggtggcgacagaagcgacggtgacgtcgtcggggaaataa
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