Caballeronia sp. SBC2: SBC2_32900
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Entry
SBC2_32900 CDS
T06459
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
caba
Caballeronia sp. SBC2
Pathway
caba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SBC2_32900 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caba03019
]
SBC2_32900 (recQ)
03400 DNA repair and recombination proteins [BR:
caba03400
]
SBC2_32900 (recQ)
Enzymes [BR:
caba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SBC2_32900 (recQ)
Messenger RNA biogenesis [BR:
caba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SBC2_32900 (recQ)
DNA repair and recombination proteins [BR:
caba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBC2_32900 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QIE25229
LinkDB
All DBs
Position
complement(3609198..3611045)
Genome browser
AA seq
615 aa
AA seq
DB search
MSRSLEILKEVFGYPVFRGQQGDIVDHVAAGGDSLVLMPTGGGKSLCYQIPALLRREAGF
GAGIVVSPLIALMQDQVAALSEVGVRAACLNSTLTGAEAAATERALRNGEIDLLYVAPER
LMTPRFLELIESVRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIVHRLALEDARIFVSSFDRPNIRYRIVEKDNARAQLLDFIRAEHTNPDKTTDAG
VIYCLSRRKVEETADWLKSQGVRALPYHAGMEYEIRQRHQEMFKREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
THKRVQGGKLDALLGLCEAASCRRVRLLGYFGEASEPCGNCDTCLEPPESWDATREAQMA
LSCVYRAHKASGYHFGAGHLIDILRGSRSEKLLQRGHEKLSTFGLGASLSEQEWRAVFRQ
LVAFGYLAVDHDGFGALILTEASKAVLKGEQNVTLRKYVKPTRTRQSSSRTGERADPTAG
MSPRIKARWERLRAWRASMAKSDGVPAYVIFHDATLAEIARNEPDSIEDLSQIPGIGARK
LERFGDELLEVVGAN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgttcgctcgaaattctcaaggaagtatttggctaccccgttttccggggccag
cagggcgatatcgtcgatcatgtggctgccggcggagactcgcttgtgctgatgccgacc
ggcggcgggaagtcgctgtgttatcagattcctgccttgttgaggcgtgaagccggtttc
ggcgccggaatcgtcgtgtcgccgttgattgcgttgatgcaggatcaggtggcagcgtta
agcgaagtcggcgtgcgtgctgcgtgcctgaattcgacactcacgggcgccgaagccgct
gcaaccgagcgcgcgttgcgcaacggggaaatcgacctgctatatgtcgccccagaacgc
ctgatgacgccccgttttcttgagttgatcgagagcgtgcgcatcggtttgtttgcgatc
gacgaagcgcattgcgtgtcgcaatgggggcacgatttccggccggaatatatccagttg
tcggtgctgcatgagcggtttccatcggtaccgcggattgcgttgacggcaaccgccgac
gccattacacgcgatgaaatcgtgcatcgcctggctttggaggatgcgcgtattttcgtc
tccagctttgaccggccgaacatccggtatcggatcgtggaaaaggacaatgcgcgtgcg
cagttgctcgatttcattcgcgctgagcacacgaacccggacaaaaccaccgacgctggc
gtcatctattgcctgtcgcgacgcaaggtggaagaaaccgctgactggctcaagagccaa
ggggttcgcgctttgccgtatcacgcggggatggagtacgaaatccgtcagcggcatcag
gagatgttcaaacgcgaagagggcatcgtgatgtgcgcgacgatcgctttcggcatgggt
atcgacaaaccggacgtgcgattcgtggcgcatctggatttgccgaagagcgtggaaggc
tattaccaggaaaccgggcgcgcgggccgtgacggcatgccagcgaacgcatggatggcg
tacggtctcggcgacgtggtgcagcagcgcaagatgatcgacgaatcggacgcggacgat
acccacaaacgcgtgcagggtggcaagctcgacgcgctgcttgggttgtgcgaggcggcg
tcgtgccggcgcgtgcgtttgctcggctacttcggtgaggcgagcgagccatgtggtaat
tgcgatacgtgcctcgagccgccggaatcatgggatgccacccgcgaagctcagatggca
ctctcttgcgtgtaccgggcgcataaagccagtgggtatcatttcggcgcgggtcatcta
atcgatatcctgcgcggtagccgttccgagaaattactccagcggggtcacgaaaaactt
tctacgttcggacttggcgcctcgctgtctgagcaggagtggcgcgctgtgtttcgccag
ttggtcgcgtttggttatctcgctgtcgaccacgacgggttcggcgcactgatcctcacc
gaggcaagcaaggccgtgcttaagggcgagcagaacgtgacgcttcgaaagtacgtcaag
ccaacgcggactcgccagtcatccagccgaacaggcgaacgcgcggatccgacggctgga
atgtcgccgcgcatcaaggcacgttgggaaaggctgcgcgcgtggcgtgccagcatggcg
aaaagcgatggcgtgccagcgtacgttattttccacgatgcaacgctcgcagagatcgcg
cgcaatgagccggattccattgaggatctcagccagattccggggatcggcgctcgcaaa
ctcgagcgtttcggcgatgagttgctcgaagtggtgggtgcgaactaa
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