Caballeronia sp. SBC2: SBC2_35080
Help
Entry
SBC2_35080 CDS
T06459
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02020
Two-component system
caba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBC2_35080 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SBC2_35080 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caba03021
]
SBC2_35080 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
caba02035
]
SBC2_35080 (fliA)
Transcription machinery [BR:
caba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SBC2_35080 (fliA)
Bacterial motility proteins [BR:
caba02035
]
Flagellar system
Flagellar assembly proteins
Stator
SBC2_35080 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QIE25439
LinkDB
All DBs
Position
3855264..3855995
Genome browser
AA seq
243 aa
AA seq
DB search
MYNAQGKLSQDEVLTRYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYASQRIRGAMLDELRANDWLPRSMRKTSREVESAVHKVEQHLGRSASEQEVAEH
LSMPLVEYQAMLQDLHGSQLIYYEDFDRSSDDEPFLDRYCVDKADPLSALLDGSLRSALV
EAIDKLPEREKLLMSLYYEKGLNLREIGAVMEVSESRVCQLHSQAVARLRAKLREQAWSG
VEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcccaaggaaaactgtcacaggacgaggtcctgacccgctacgcaccgctg
gtgcgccggctcggactgcagctcgtggcaaaaatgccggccagcgtcgatctggacgac
ctgattcaggccggcatgatcggcttgctggatgcggccagccgctataaggaagatcag
ggcgctcagttcgagacctacgccagccagcggattcgcggcgcgatgctcgacgagttg
cgcgccaatgactggctgccgcgcagcatgcgcaagacctcgcgcgaagtggaatccgcg
gtgcataaggtcgagcagcatctcggccggtccgcgagcgaacaggaagtggccgagcat
ctgagcatgccgctcgttgaataccaggccatgctgcaggatctgcatggcagccagttg
atctattacgaagacttcgaccgttcttcggatgacgagccgtttctcgaccgttattgc
gtcgataaagccgacccgctttccgcattgctcgacggcagcttgcgctcggcgttggtt
gaagccattgataaattgcctgagcgcgaaaagctgctgatgagcctgtattacgagaag
gggctgaatctgcgcgagattggcgcggtaatggaagtcagcgaatcacgtgtatgccag
ttgcatagccaggccgtcgcgcggctgcgggcgaagttgcgggaacaggcgtggtcgggc
gtggaggcttga
DBGET
integrated database retrieval system