Caballeronia sp. SBC2: SBC2_65170
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Entry
SBC2_65170 CDS
T06459
Symbol
degU_2
Name
(GenBank) Transcriptional regulatory protein DegU
KO
K07684
two-component system, NarL family, nitrate/nitrite response regulator NarL
Organism
caba
Caballeronia sp. SBC2
Pathway
caba02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SBC2_65170 (degU_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
caba02022
]
SBC2_65170 (degU_2)
Two-component system [BR:
caba02022
]
NarL family
NarX-NarL (nitrate respiration)
SBC2_65170 (degU_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_38
Sigma70_r4
CENP-B_N
HTH_24
HTH_10
HTH_23
HTH_20
HTH_28
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QIE28441
LinkDB
All DBs
Position
pSBC2-2:1170976..1171653
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AA seq
225 aa
AA seq
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MTIRILLIDDHTLFRSGVRALLQRQPDFEVVDDAADGIEGFKRAKQHRPDVVLLDLNMPG
LSGIETLQLLQQDLPDTAVIMLTVSEDVDELTRALREGACGYLLKNMEADALAAMIRRAA
EGESVIAESMTQRLIAQMRTPARAEDTEPPPSLEPRSSPASPVLTPRERDIVRVLARGAS
NKDIARELDLAESTVKIHVRNVLRKLNLSSRVQIAIHPLARDLAE
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgtattcttttaatcgacgaccacacgctgtttcgctccggcgtgcgcgcg
ttattgcagcgtcagcccgacttcgaagtcgtggacgacgccgccgatggtatcgaaggg
ttcaagcgcgcgaagcagcatcgcccggacgtggtcctgctcgatttgaacatgccgggg
ttatcgggtatcgaaacgttgcagttgctccagcaggatttgccggacaccgcggtcatc
atgctgaccgtgtcggaagatgtggatgaactgacccgcgcgctgcgtgaaggtgcgtgc
ggctatctgttgaaaaacatggaagccgatgcactcgccgccatgatccgccgcgcggcc
gagggcgaatccgtgatcgcggagagcatgactcagcggctgatcgcacaaatgagaacg
ccggcgcgagcagaagacacggagccgcccccgtcgctcgaaccacgcagctcgcctgca
tcgcctgtgttaacgccaagagaacgcgatattgtgcgggtcctggcgcgcggtgcgagc
aacaaggatatcgcgcgtgaactcgacctggccgaaagcaccgtgaagatccacgtgcgc
aatgtgcttcgcaagctcaatctgtcgagccgcgtgcagatcgcgatccacccgctcgca
cgcgacctggccgagtga
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