KEGG   Caldithrix abyssi: Cabys_1570Help
Entry
Cabys_1570        CDS       T04549                                 

Gene name
gatB
Definition
(GenBank) gatB aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
caby  Caldithrix abyssi
Pathway
caby00970  Aminoacyl-tRNA biosynthesis
caby01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:caby00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Cabys_1570 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:caby03029]
    Cabys_1570 (gatB)
Enzymes [BR:caby01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Cabys_1570 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Cabys_1570 (gatB)
Mitochondrial biogenesis [BR:caby03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Cabys_1570 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey Crr6
Motif
Other DBs
NCBI-ProteinID: APF18319
UniProt: H1XQR0
LinkDB All DBs
Position
1873547..1874986
Genome map
AA seq 479 aa AA seqDB search
MEYEAIIGLEVHTQLLTETKIFCGCSTKFGAEPNSQTCPVCLGMPGVLPVLNKKVVEFAV
LLGLATHCQIRRYNRFARKNYFYPDLPKGYQISQFEEPICENGYLEIETESGKKRIGLIR
IHMEEDAGKSVHDETYVQANESLIDLNRCGTPLLEIVSAPDIRSPQEAHAYLAKLRQLVR
YLGISDGNMEEGSFRCDANISVRPVGQKEYGTRTELKNMNSFAHVQKALEYEIARQTELL
KAGKQVEQQTLLWDADNNVARAMRGKEESHDYRYFPEPDLVPIHIDVQWFDQIQKALPEL
PEEKFQRFTVDYKLPEYDARLLTESREVADYFERVAQLFNDFKMISNWMLGEVARALNEQ
KISITEFKLAPQTLADLLKAIKNKVISGSAAKKVFEYLLQNDSSVEQAIEKLGLKQISDE
SQIEQFVVQVIEQHPAEVESFKAGKTKVIGFLVGQVMRLSRGKANPQLVNQLLQKKLNG
NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt
atggaatacgaagcgataatcgggctggaagtccacacccaacttttaaccgagaccaaa
atcttttgcggttgtagcactaaattcggcgcggaacccaattcgcaaacctgtcctgtt
tgtctgggcatgccgggcgtgttgcccgttttaaataaaaaagtggtggaatttgccgtg
ctgctcggcctggcaacccattgccagatcagaagatacaatcgttttgcccgtaaaaat
tatttttatccagacctgcccaagggttatcaaatttcgcagtttgaagaacccatttgt
gaaaacggctatctggaaatcgaaacggaaagcggtaaaaagcgcatcggtttaatccgc
attcacatggaagaagacgccggtaagtcggttcatgacgaaacatacgtgcaagccaac
gagtcgttaattgatcttaaccgctgtgggacgccattgcttgaaattgtcagcgcgccg
gacattcgttcgcctcaggaagcgcatgcctatttagcgaagttgcgccagcttgttcgc
taccttggcatcagcgacggaaatatggaagaaggcagttttcgctgcgacgccaatatc
agcgttcgaccggtggggcagaaagagtacggaacgcgcaccgaacttaaaaacatgaac
tcttttgctcacgtgcaaaaggcgctggaatatgaaattgcccgccaaacagagctgtta
aaagccggtaaacaggtggagcaacaaaccctgctgtgggatgcggacaataatgtggcc
cgcgccatgcgtggtaaagaagaatcgcacgactaccgctactttccggagccggatctg
gttcccattcacattgatgtacaatggttcgatcaaatacaaaaggctttgcccgagctg
ccggaagaaaaatttcagcgatttaccgtcgattacaagctgccagagtacgatgcccgt
ctgctgaccgaaagtcgcgaggtggcggattattttgaacgcgtcgcccagctatttaac
gattttaagatgatcagcaactggatgcttggagaggttgcccgcgctttaaatgaacaa
aaaataagcattaccgaatttaaactggccccgcagactttagccgatcttttaaaagcc
attaaaaacaaagtgatcagcggcagcgccgccaaaaaggtttttgaatatttgctgcaa
aatgacagcagcgttgaacaggccattgaaaagctgggattaaagcagatttccgatgaa
agccagatcgaacaatttgtggtgcaggttatcgaacagcatcctgccgaggtggaaagc
tttaaagcgggtaaaaccaaggtcattggatttttagtgggacaggtgatgcgcctttcc
agaggtaaagccaatccgcagctggtcaaccaactgttgcaaaagaaattgaacggatag

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