Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_06955
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Entry
RN83_06955 CDS
T04624
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
cacn
Cutibacterium acnes KCOM 1861 (= ChDC B594)
Pathway
cacn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cacn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RN83_06955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cacn03400
]
RN83_06955
Enzymes [BR:
cacn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RN83_06955
DNA repair and recombination proteins [BR:
cacn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RN83_06955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALD69844
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All DBs
Position
1499729..1502965
Genome browser
AA seq
1078 aa
AA seq
DB search
MTTNTSFDITRPLPQGTVLLAASAGTGKTWTISAVCAKAIATGLVHMENLLLVTFNRSAA
RELRGRVYERLVNTRLLLAGAREPSDPCDWSIIRCGQAGLTRVESALDNFDRAVITTTHE
FASRMLVELGVLSDHDPSSVLMTDLAPLATEVSDDHYLAQYLDCDRPPSVREKRELSRDV
AVKYGEVPIFSKEDADTPVQDVLWALSVREDVRRRSKSRSVHTFDDLIGDLVKALRDPYR
GPLACATLANRFGLVMVDEFQDTDPLQWEILQRAFHGHSNLWLIGDPKQSIYAFRGADIH
AYQDAAQSASHVLHLDVNYRTDKPIVEAVNTLFSNAQLGHGISTELVTAHHQESRIKTAA
TDGPRYHWSQPFQIRCLQAPAGAQLNTAASDQFVTEDLVNQVIMMLEGGTVVQDGDGSRP
LRPNDIAILVRTRRRGAELATALSQVHQPAVFSGASPVWSSQAAEDLMTLLEALENTDER
LRTRLCLSDLIGATPADLAASDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLV
RLVSMAGGERYVTDLRQVAQKAHIAACEGRLTATATAAWIREQQQLAGDDEPRRLDSDQQ
AVIIMTVHEAKGLGFPVVLLPDITNGWAPKQSINGPIVWHDGQRRVLDISSQGTDRSIAI
ESHEEDERGENLRLLYVALTRARSAVRLWWSPCPRRHRWSAFQRLVEMDRTTGELGSGVA
GTDPGTLPWFNSGPIATVIAPANQKLLTRSVSAQPRACVVPRTLTRPLDTAFARTSYSGL
TANLHAAVSESMTNNLIDEPVDDESVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTAATDL
SSEVLSITRRALRMSPLPDVPPSELATSLEQVLHSDLGPLAPGMTLADFSPADRLAEMNF
ELAMTQHGRSTTMTDLASLLCDPSLVPPDDPISGYGEILAHIPNGDQALRGFLTGSIDAV
LRRPDGRHLVVDYKTNRIPGVHKLSPHMYDAHTMRAIMFSSHYPLQGLLYSAALHRFLAS
SLPGYDPATHLGPIGYLFVRGMADRPVPDGDMPDGVFTWHPRPELIEAISEQLGGLHD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacacctcctttgacatcactcgaccactgccacaaggaaccgtcctgctg
gcagcaagtgccgggactggaaagacatggaccatctcggcggtgtgcgcgaaagctatc
gcgactggtctggttcacatggagaaccttctcctggtgaccttcaaccgatcagctgcc
cgcgagctgcgcggacgagtctacgaacgccttgtcaacacccgtttgctactagcaggc
gcccgagaaccctctgacccctgcgattggtcgattatccgatgtggccaggcaggactc
acacgagtggagtctgctctcgataacttcgacagggcggttatcaccaccacccatgag
ttcgcgtcccgaatgcttgtggagttgggagtgttatcagaccatgacccgtcctcagtg
ctgatgactgatcttgcccccctagcaaccgaggtatccgatgaccactacctggcacag
tatctcgactgtgaccggccgccctcagtgcgcgaaaaacgcgagctatctcgagatgtc
gcggtgaaatacggcgaggttccgatcttctccaaggaagatgcagacacgcctgtgcaa
gacgtgctgtgggccttatcagtacgagaagacgtccggagacgctccaaatcgcggtcg
gtgcatacctttgacgaccttattggcgatcttgtcaaggctcttcgtgacccataccgt
ggcccgttagcttgcgcaacgcttgctaatcggtttggactcgtcatggttgacgagttc
caagacactgatcctctgcaatgggagatactgcaacgagcctttcatggccacagcaac
ctttggctaatcggagatccaaaacaatcgatctacgccttccgaggggctgacatccac
gcttatcaagacgcggcccaatctgccagccatgtccttcatcttgacgtcaactaccga
actgataagcccattgtcgaggccgttaataccctctttagcaatgctcagttgggccac
ggtatttcaacggagttagtgacggcccatcatcaggaatcccgaattaagacagcggcc
accgatggaccgcgctaccactggtctcaacccttccagatccgctgcctccaagctcct
gccggcgcgcagctcaacacagcggcctccgatcagttcgttactgaagacctcgttaat
caggtaatcatgatgctcgagggcggaacggtcgttcaagatggcgacgggtcaaggcca
cttcgccccaacgacatcgcgatcctggtgcgaacacgtcgcaggggtgccgaacttgcg
acagcgctatcacaggtccatcagcctgcagtgttctctggtgcttcaccggtgtggtcg
tctcaggcggctgaagatcttatgaccttgctcgaggctctcgagaataccgatgaaagg
ctgcggaccaggttgtgcctgtctgacctcatcggtgcaacgccagccgatttggcagca
tccgactcgcgggtgcgctctgacctggcgattgacctggctcgctggtcgagtacctgg
acgatgacgggggtatggggaacggttgaggctgcccttcatcgccccggtgtgctggtg
cgtctggtaagcatggcaggtggtgagcgatacgtcaccgatctacgtcaggtggcacaa
aaggcgcatattgcggcctgtgaaggaagattgacggcgacggcaaccgcagcatggatc
cgcgagcaacagcaactggcaggcgacgacgaaccccgtcgccttgatagtgaccaacag
gctgtcatcatcatgaccgtccatgaggcaaagggtctgggattccccgtcgtgttattg
cctgacatcaccaatggatgggcgccgaagcagagcatcaatggtccgatcgtgtggcat
gacgggcaacggcgcgtgttggacatcagttcgcagggaaccgatcgttccatagcaatc
gagagccacgaagaggacgagcggggcgagaaccttcgcttgctgtacgtcgccctcacc
cgcgcccgatctgctgtacgactatggtggtccccttgtcctcggcgtcatcgatggtcc
gccttccaacgccttgtcgagatggaccgcacgacgggcgagctcggctcaggcgttgcc
gggaccgaccccggaactctcccctggttcaactccggaccgattgcgacagtaatagca
cctgctaaccagaaactccttacccggtcggtcagcgcccagcctcgtgcctgcgttgtc
cctaggacgctgacgcgaccactcgacaccgcgtttgcccgaacctcatattcaggactg
acggccaacctgcacgcagccgtgtcggaatctatgactaacaacctcatcgacgaaccc
gttgacgacgagtccgtcgatgacacagcccccggtctgtgtgggttacccggaggaacc
tccttcggcaccctggttcacacggtccttgagtacatcgacaccgcggctaccgacctc
tccagcgaggtactctcaatcacccgcagagcccttcgaatgtcgcccttaccagacgtc
ccaccatctgaactcgccaccagtttggagcaggttcttcatagtgatctcggacccttg
gccccgggcatgaccttggcagatttttccccggcggatcgactggctgagatgaatttc
gaacttgccatgacccagcacggacgatcgaccaccatgacagacctagcgtccctcctc
tgcgatccgagtctggtgccacccgacgatcccatcagcggctacggcgaaatattggcc
catatccccaatggcgaccaggcgctacgcggctttctcacgggttcgatcgatgctgtc
ttgaggcgacccgatggtcgtcatctagttgtcgattacaagacgaaccgaattcctgga
gtccacaagctcagtcctcatatgtatgacgcacacacgatgagggccataatgttcagt
tctcactacccgctgcaaggattgttgtattcggcagccttgcatcgattcctggcatca
agtctgcctggatacgaccccgcaacccatcttggccccattggctacctttttgttcga
ggtatggctgatcgtccagtacccgacggtgacatgcctgacggagtttttacctggcat
ccgagacctgaactcattgaggcgatcagcgagcaattgggaggtctccatgactga
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