Gottschalkia acidurici: Curi_c03110
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Entry
Curi_c03110 CDS
T02255
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cad
Gottschalkia acidurici
Pathway
cad03420
Nucleotide excision repair
cad03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Curi_c03110 (pcrA)
03430 Mismatch repair
Curi_c03110 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cad03400
]
Curi_c03110 (pcrA)
Enzymes [BR:
cad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Curi_c03110 (pcrA)
DNA repair and recombination proteins [BR:
cad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Curi_c03110 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Curi_c03110 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
AAA_30
ResIII
AAA_11
DUF3553
Hint
DEAD
Hint_2
MlaD
Motif
Other DBs
NCBI-ProteinID:
AFS77391
UniProt:
K0AYE9
LinkDB
All DBs
Position
332725..336018
Genome browser
AA seq
1097 aa
AA seq
DB search
MNFLDGMNDRQKEAVLATEGPLLVLAGAGSGKTRVLTYRIAHLIEEKGVSPYSILTLTFT
NKAANEMKERIKKLIGDRVDDVWAGTFHSICVRILRRDIDKIGYDRSFVIYDTTDQKTLV
KDCIKEKDLNEKMYDPNSMLNFISSQKDKLISPEMYIKENDGDFRERQKGELYALYQKKL
KVNNALDFDDLIGKTIELLKDNPDVLEYYQNKFKYILVDEYQDTNRAQYTLIRLLSERYK
NICVVGDDDQCLVEGMKVNTPNGEIPIEKLLENDKVYSPSGWGKVMEGSINKVIKKEYNG
SIVNIKTKSGKEIKLTPNHITFAKLNPEVGIYYVYLMYKKELGYRIGQTQGVRSKRKGDI
CNGLAVRLNQENADKIWILKVCESKEDASYYEQLYAFKYNIPTVLFHPRSRRINFNQEYI
NRLYSEIDTHNNVIKLMEDLMVFEEYPHHRAGAVIRNNTFRRLVKLTFFGGRVTGEESGW
HSHRICLNTSGEELREKAESSKFPVRDGKRETWRVETERKDYDEINEYAKKLMALHDDLE
VDRRTKLTEDTAFNYMPASHIKPSMSIAVLEDNKIKEDIVEEVIIEEYNGFVYDISVPNF
RQYISQGIVVHNSIYGWRGADIRNILDFEKDYPQSKTIKLEQNYRSTKTILNAANSVIGN
NLGRKGKDLWTSNEDGNCINIYNASDEHSESQFIVSKIKEIVEEKSLNDFAILYRTNAQS
RVVEESLMRSNIPYRIVGGLKFYDRKEIKDIVAYLRVIQNPVDNISLKRIINTPKRGIGK
TTIDKVESYSVEKGESMYSVMIDAEEIPGLSQRAVNNLKDFISNIGKFMAMKELLGVKSL
IENVIDSTGYIRELEQEDTIEARGRIENIEEFLSVAIDYENSSEESNLEDFLANISLLSD
IDRLDEEETDTVTLMTLHSAKGLEFPIVFMVGMEEGLFPSSRALTDENQLEEERRLCYVG
ITRAEQELFMTYSNQRMLYGKTNYNIPSRFLRELPENLVEGCNKDKSIIKDINKASNMGS
TSSKYFKGFAIEYKKPEPKKVSGAGKISTGSKVKHKSWGVGTVVQVKGEGDSTEVTVAFE
SQGIKKIMLAYAPIEVI
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctagatggaatgaatgacagacaaaaggaagctgtacttgctactgaggga
ccccttttagtccttgcaggagcaggtagtggtaaaactagagtgttaacttatagaata
gcacacttaatagaagaaaaaggtgtaagtccttatagtatattaacacttacatttaca
aataaagctgctaatgaaatgaaagaaagaataaaaaaacttataggtgatagagtagat
gacgtatgggcaggaacttttcactctatctgtgtgagaattttaagaagagatatagat
aagattggatatgatagaagttttgtaatatatgatactacagatcaaaaaactttagtt
aaagactgtataaaagaaaaagatctgaatgaaaaaatgtatgatccaaactcaatgcta
aattttataagttctcagaaagacaagcttatttcgccagagatgtatataaaggaaaac
gatggagattttagagaaagacaaaaaggagaactttatgcgctctatcagaagaaactc
aaagtaaataatgcactagattttgatgatcttatagggaaaactatagagctactaaaa
gataatccagatgtattagaatactaccaaaataagtttaaatatattcttgtagatgag
taccaagatactaatagagctcaatacactttaataagactattatcagaaagatataag
aatatttgcgtagttggcgatgacgatcaatgcttagttgagggcatgaaagttaacact
ccaaatggtgaaattcctatagaaaagcttttagaaaacgataaagtgtattctccttct
ggatggggaaaagttatggaaggaagtattaataaagttataaaaaaagaatataatgga
tctatagttaatataaaaactaaatccggaaaagagataaaacttactccaaatcatata
acttttgctaaattaaatcctgaagtaggaatatattatgtatatttaatgtataagaag
gaattaggatataggattggacaaactcaaggggtaagatctaaaagaaaaggcgatatc
tgtaatggattagctgttagacttaatcaggaaaatgcagacaagatatggatattaaaa
gtttgtgaaagcaaagaagatgcatcatattatgaacaattatatgctttcaaatacaat
atacctacagttttattccatccaagatcaagaagaattaactttaatcaagagtatata
aatcgtctatatagtgagatagatactcacaataacgtgataaaacttatggaagattta
atggtatttgaagaatacccacatcatagggcaggtgctgtaataagaaataataccttt
agaagattagtaaaactaacgttttttggaggcagagtaacaggggaagaatcaggatgg
catagtcatagaatatgcttgaatacttcaggggaagaattaagagaaaaggcagaatct
tcaaaatttccagtaagagatggaaaaagagaaacatggagggtagagactgaaagaaaa
gattatgatgagataaatgaatatgctaaaaagctaatggctttgcatgatgatttagaa
gtagatagaaggactaaactaacagaagatacagcatttaattatatgccggcttctcat
ataaagccttctatgagtattgcagtacttgaagacaataaaataaaagaggacatagta
gaagaagttattatagaagaatataatggattcgtttatgatatatcagtgccaaacttt
agacaatatatatctcagggaatagtagttcataactcaatatatggatggagaggagca
gatataagaaatatactagatttcgaaaaagactatcctcaatctaaaactataaaatta
gaacaaaactatcgttcaacaaaaactatattaaatgctgcgaattcagttataggaaat
aacttaggtagaaaaggaaaagatctgtggacttctaatgaagatggtaactgtatcaat
atatataatgcatcagacgagcatagtgagtcgcaattcatagtatcaaagataaaggaa
atagtagaagaaaaaagcttaaatgactttgctatactttatagaacaaatgcccaatca
cgtgtagtagaggaaagtttgatgagatccaatataccttatagaattgtaggaggatta
aaattctacgatagaaaggaaataaaggatatagtagcttatctaagagttattcaaaat
cctgtggacaatattagtttaaaaagaataataaatactcctaaaagagggataggtaaa
actacaatagataaagtagagagctatagtgtagaaaaaggggaaagcatgtatagtgtt
atgatagatgcagaagaaataccagggctttctcaaagagctgttaataacttaaaagac
ttcatatcaaatatcggaaaattcatggctatgaaagaattattaggagtaaaatctttg
atagagaatgtaatagattcaactggatatataagagaactagaacaagaagatacaata
gaagcaagaggtagaatagaaaatatagaagagttcttatctgttgctatagactatgaa
aatagcagtgaggaaagcaacttagaagattttctagctaatatatcacttctttcagat
atagatagattagatgaagaagaaacagatacagttacacttatgactctacacagtgcg
aaaggtcttgaattcccaatagtatttatggtcggaatggaggaaggtctatttccttca
tcaagagcacttacagatgaaaatcaattagaagaagagagaagactttgttatgtaggt
ataactagagcagaacaagagcttttcatgacttactctaaccaacgtatgctatatgga
aaaactaactataatataccttcgagatttttaagagagttaccagaaaacttagttgaa
ggttgtaataaagataaatccattattaaagatataaataaggcgagtaatatgggaagt
acaagtagtaaatattttaaaggatttgctattgaatataaaaaacctgaacctaagaaa
gtaagtggagcgggaaaaataagcacgggttcaaaagtaaagcataaatcatggggagta
ggaactgtagtacaagtaaaaggtgaaggagacagtaccgaggtaactgtagcatttgaa
agtcagggaattaaaaagattatgttagcctatgcacctatagaagttatataa
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