Citrobacter amalonaticus FDAARGOS_165: AL524_11155
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Entry
AL524_11155 CDS
T04738
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_11155
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL524_11155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
UPF0547
AAA_16
zf-tcix
SLFN-g3_helicase
zinc_ribbon_2
AAA
AAA_22
DZR
Motif
Other DBs
NCBI-ProteinID:
AMG53604
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Position
complement(2315432..2317192)
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRRHHTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQSEFSLLIVDECH
RIGDDEESQYQQILTHLSNANPHIRLLGLTATPFRLGKGWIYHFHYHGMVRGDDKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIIEFAQTRKGVMIFAATVEHAKEIAGLLPKADSALITGDTPGPERDELIDAFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYSPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLLEHFGRRCQGWFEDDEG
HREQCDFRFRFKNCPQCNTENDIAARRCRECDTLLVDPDDMLKAALKLKDALVLRCSGMT
LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGVPLRWITA
ADILAQQPLLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttacacttcgcccctaccagcaagaagccgtggatgccacgctcaaccatttc
cgtcgccatcacacgcctgcggtgattgttctgcccactggcgccggtaaaagcctggtg
attgctgaactggcgcgcgtcgccagagggcgcgtgctggttctggcgcatgtgaaagag
ctggtggcgcaaaaccatgccaaatactgcgcactggggctggaagccgatatttttgcc
gccggacttaaacgtaaagagagccacggtaaagtggtgttcggcagcgttcagtccgtg
gctcgcaatctggacgccttccagagcgagttttcgctgctgattgttgatgaatgccat
cgtatcggcgatgacgaagagagccagtatcagcagatactcacccatctgagcaacgcc
aatccccacattcgcctgctggggctgaccgccaccccttttcgtctgggcaaaggctgg
atctatcattttcactaccacggtatggtgcgcggcgacgacaaggcgctgtttcgcgac
tgcatttacgaactgccgctgcgctacatgattaagcacggctatcttacgccgccggaa
cgcctcgacatgccggtggtgcagtacgatttcagccgcctgcaggcgcaaagcaacggt
ctgtttagcgaagccgatctgaatcgtgagctgaaaaagcagcagcgtatcacaccgcat
atcatcagccagattattgaattcgcccagacccgcaaaggggtgatgatttttgccgcc
accgtcgagcatgccaaagagattgccggactgctgccgaaagcggattccgcgctgatt
accggcgacacgccgggtcctgaacgtgatgagctgatagacgcgtttaaggctcagcgt
tttcgttatctggtcaacgtctccgtcttaaccacgggcttcgatgccccgcacgtcgat
ctcattgccattctgcgccccaccgagtcagtcagtctgtaccaacaaattgtgggtcgc
ggcctgcgtctcgcaccgggaaaaacggactgtttgattctggattacgccggtaatccg
cacgatctctattctccggaggtggggagcccgaaaggcaaaagtgataacgtgccggtc
caggtcttctgcccggcctgcggtttcgcaaataccttctggggcaaaaccaccgctgac
ggtacgctgctcgaacattttggccgccgctgtcagggttggtttgaagatgatgaaggg
catcgcgagcagtgcgattttcgcttccgctttaaaaattgcccgcagtgcaacaccgaa
aacgacattgccgctcgccgctgtcgggaatgcgatacgctccttgtcgatcccgacgac
atgctgaaagcagcgttgaaactgaaagacgcgctggtgctccgctgtagcggcatgacg
ttgcagcacggccatgacgagaaaggcgaatggctgaaaatcacctactatgacgaagat
ggcgcggacgttagcgagcgctttcgcctgcaaacccctgcccaacgtacggcatttgaa
caactgtttatccgcccgcatacccgcacgccaggtgtgccgctacgctggatcaccgcg
gcggatatcctcgcgcaacaacccttgttacgccatcccgactttgtggtggcgcggatg
aaaggccagtactggcaggtgcgggaaaaggtattcgattacgaggggcgtttccgtcgg
gcacatgaattacgcggttaa
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