Citrobacter amalonaticus FDAARGOS_165: AL524_23840
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Entry
AL524_23840 CDS
T04738
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caf03016
]
AL524_23840
Enzymes [BR:
caf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL524_23840
Transfer RNA biogenesis [BR:
caf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL524_23840
Prokaryotic type
AL524_23840
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMG55880
LinkDB
All DBs
Position
complement(4987827..4988771)
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AA seq
314 aa
AA seq
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MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVAFTPEQLAAALDTFRGDIE
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEEDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLTVSKYPVDRMVTLERLREMVEQAEQQGIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTNGAPQEGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggataagccg
cagggcatgtccagcaatgatgtactgcaaaaagttaaacgcatttataacgccaatcgc
gccgggcataccggggcgctggatccgttagcgaccggcatgctgccgatttgcctcggg
gaagcgaccaagttttcgcagtatctgctggattctgacaagcgttatcgggtgattgcc
cgtctgggacagcgtacagacacgtccgatgccgatgggcaaatcgtacaggagcgcccg
gtcgccttcacccccgagcaactggcggccgcgctggacacgttccgcggtgatatcgag
caggtgccatcgatgtattcggcgctgaagtatcagggtaaaaaattgtacgaatacgcg
cgtcagggcattgaagtgccgcgtgaagcccgaccgattaccgtttacgagctgttgttt
atccgtcatgaagaggatgaactggagctggaagtgcactgttcgaaaggcacttatatt
cgtactattattgacgatctgggtgagaagctgggatgtggcgcgcatgtgatcttcctg
cgtcgtctgacggtcagcaaatatccggtggatcgtatggtcacgctggagcgtctgcgt
gaaatggtcgaacaggcggagcaacaggggatcccggcagcacagttgcttgatccgctg
ttgatgccgatggacagtccggcatcggactaccctgtcgttaatttgccgctaacctca
tcggtttacttcaaaaacggtaacccggttcgcacgaacggcgccccgcaggaagggtta
gtccgtgtcacggaaggtgatgacggtaaatttatcggtatgggcgagatcgacgacgaa
ggtcgcgtggcgcctcgccgattagtggtggagtatccggtgtag
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