Clostridium autoethanogenum: CAETHG_1692
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Entry
CAETHG_1692 CDS
T02883
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cah
Clostridium autoethanogenum
Pathway
cah03420
Nucleotide excision repair
cah03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CAETHG_1692
03430 Mismatch repair
CAETHG_1692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cah03400
]
CAETHG_1692
Enzymes [BR:
cah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CAETHG_1692
DNA repair and recombination proteins [BR:
cah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAETHG_1692
MMR (mismatch excision repair)
Other MMR factors
CAETHG_1692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
SLFN-g3_helicase
UvrD_C_2
CbiA
DEAD
AAA_30
AAA_16
T2SSE
ResIII
nSTAND3
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AGY75913
UniProt:
U5RX49
LinkDB
All DBs
Position
complement(1821149..1823278)
Genome browser
AA seq
709 aa
AA seq
DB search
MYRDDLKKELEKEVELDFEREKLKEVLKEIEVQILEYIESRKKVIDYILKLREKNLEQYE
DDEDKVIEYFNHEMYEKEEQYRLVNKSIKELTILSNSPYFGKVKFQDEYGEEEIYIGRFG
VTGRKSYEPIVIDWRSPVSSLFYAGKLGTVKYTSPMGEVETEVLSKRQFIIKKSNLVGMF
DSSIDVKDEILQMVLSKNAGEKLKDIVMTIQKEQDNLIRQPRTGAIVVNGVAGSGKTTIA
LHRVAYLLYNYRKVLQGKVLILGPNSIFIDYISLVLPSLGEEKVTQTTFREFAEDMLNVP
YIMDFKDYMEKVLSGQKDFSEEIEYKGSLQYVQDIDNFIGSLEKDCFKIEDVFFYDKLIM
SGEDIDKMLNYYFKDMPLFKRSARIKRVIYSKVRDERNRLIISIQKEYENKVKSLTESEL
NDCGNELEYKRRNDIRDVIKEVINIKKNKLIWLKNPDVITLYNDFNGNKLLIYDDLAPIL
YLKIKLEGLRYRDEVRHIVIDEAQDYSPLQFRVIYELTKCKSFTIVGDTNQKIIFSKETP
AVEKLENILPDLEIKRFSLNKSYRSTNEIIDYANKYLEGDKTVPLVRSGKKVVEKRVDNS
KELVDKILDNVVKLKERGYESIAIICRDLKDTEAIGNLIKARIHINVLDREDMIYSSGEV
ILPSYFAKGLEFDAVIMIDTCEKNENTLKYIMATRALHELYVYKTSSIN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtatagagatgatttaaaaaaggaattggagaaagaagtcgagctggattttgaaagg
gaaaaattaaaagaagtcttaaaagaaattgaggtacaaattttagaatacattgagagt
agaaaaaaagtaatagactatattttaaagctaagagaaaaaaatttggaacagtacgaa
gatgatgaagacaaagttatagaatattttaaccatgaaatgtacgaaaaggaagaacag
tatagactagtaaataaaagcataaaagaacttactatactgagcaattcaccttatttt
ggtaaggtgaaatttcaggatgaatatggagaggaagaaatatacataggtaggtttggt
gtgacaggaaggaaaagttacgaacctattgtaattgactggagatcacctgtatcttct
ttgttttatgcaggtaaactcggaactgtaaaatatacatctcctatgggagaagtagaa
acagaagtgctttctaagagacaatttattataaaaaaatctaatctagtaggtatgttt
gattccagtatagatgtaaaagatgaaatcctgcaaatggtacttagcaaaaatgctggt
gaaaagttaaaagatattgtaatgactatacaaaaagaacaggacaatttaataagacag
cctagaacaggggctattgtggtaaatggagtagcaggaagtggaaaaactactatagca
ctgcatagagtagcttacttattatacaattatagaaaggttcttcaaggaaaggtactg
atattaggtcctaatagcatatttatagattatatttcacttgtacttccaagtttagga
gaggaaaaggttactcaaactactttcagagaatttgcagaggatatgctaaatgtgcct
tatataatggattttaaggattatatggaaaaagtattaagtggccaaaaagacttttct
gaagaaattgagtataagggttctttacaatatgtgcaggatatagataattttattggc
agcttggaaaaagattgttttaaaatagaggatgtgtttttttacgataaacttataatg
tctggagaagacatagataagatgcttaattattattttaaagatatgcctctatttaag
agaagtgccaggataaaaagagtcatatactcaaaggtaagggatgaaagaaacaggcta
ataatatctatacaaaaagaatatgaaaataaggtgaagagtctaacggaaagtgaacta
aatgattgtggaaatgagctggagtacaaaagacgaaatgatataagagatgtaataaaa
gaagtaattaatatcaaaaaaaataagttaatctggcttaaaaatcctgatgtgattaca
ttatacaatgattttaatggaaataagttgttgatttatgatgatttagctcctatttta
tatttaaaaataaagctggaagggctaagatatagagatgaagtaagacatatagtgata
gatgaagcacaagattattctccgctgcagtttcgggttatttatgaacttacaaagtgt
aaatcttttactatagtaggagataccaatcagaaaattatattttcaaaagagacacct
gccgtggaaaaattggaaaacatactcccggatttagagataaagcgtttttcattaaat
aaaagttatagatccacaaatgagataattgattatgctaataaatatctagaaggggat
aaaactgtacctctagttagaagtggaaaaaaagttgtggaaaaaagggtagataattcc
aaagaacttgtggacaaaatactagataatgttgtaaaattaaaagaaagaggttatgaa
agtatagccataatttgcagggatttaaaagatacggaagctataggtaatttaataaaa
gcaagaattcatataaatgtgcttgatagagaagatatgatttattccagcggcgaagtt
atacttccaagttattttgccaaaggtttagaatttgacgcggttataatgatagatacc
tgtgaaaaaaatgaaaatacattaaaatatataatggctacaagggcgctgcatgaatta
tatgtgtataagacttcctcgattaattaa
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