Caulobacter sp. K31: Caul_2184
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Entry
Caul_2184 CDS
T00651
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cak
Caulobacter sp. K31
Pathway
cak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Caul_2184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cak03019
]
Caul_2184
03009 Ribosome biogenesis [BR:
cak03009
]
Caul_2184
Enzymes [BR:
cak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Caul_2184
Messenger RNA biogenesis [BR:
cak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Caul_2184
Ribosome biogenesis [BR:
cak03009
]
Prokaryotic type
rRNA helicases
Caul_2184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABZ71312
UniProt:
B0T8G9
LinkDB
All DBs
Position
complement(2374745..2377075)
Genome browser
AA seq
776 aa
AA seq
DB search
MPFPASHPALERALAAQGYLEPTPVQAAVLEDEAIGRDLLVSAQTGSGKTVAFGLAAATT
LLGDAEKFAKAGLPMCLVIAPTRELAIQVNRELAWLYADAGAVVVNCVGGMDARREQRAL
NFGAHIVVGTPGRLRDHIERGHLDLSELKVAVLDEADEMLDMGFREDLEFILDAAPSERR
TLLFSATLAREIVQLAKSYQNDALRIDTVGRNEPHRDIEYRAVRVAPNEVEHAVVNLLRY
FESPGALVFCNTRESVRALHSKLRERGFAVVGLSGELSQRERADALQALRDGHARVCVAT
DVAARGLDLPDLGLVIHAELPVNKATLLHRSGRTGRAGKKGVSALVVPYTRRRKAEQLLM
AAGVEGHWGGAPTADEIRLKDTERLLDDPIFDEAVVEEDTALAEAMLAKRTPLEIAAALI
RTRRAKLPAPEEIYDDPRHGADPGPRSRDAGPRSNDAGDRFADRGPRDFGGDRPEREPRS
DMANSAWFRLNTGRRNNADPKWLIPLICRLGHITKKDIGSIRIFDYDTKFEISAEAEVKF
GAAVQATVRDDVTITPTTAPAARDASGPRKDYAPRPPRDDNDAPRREYAPRPPRDDAGPR
GPRANAPGSRDSSPRPSSYSADGVSNAKPYARGEEPKRDYKPRDDGPKRDFKPRPAARDD
APRDFKPRAPRDEAPKAYSPLNEGPAPRRAPREARESVPYDPEAKPAKAPYVARPRDGAP
GGKPYAGKSNDGPAKPFKGPKPFKAKGAFGDKPAFGGPKPAFGKKPAGGKAPFKKK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccgcctcccaccccgctcttgagcgggctcttgccgctcaaggctatctc
gaacccacccccgtccaagccgccgtgctggaagacgaggccatcggccgcgacctgctg
gtcagcgcccaaaccggctcgggcaagaccgtcgccttcggcctggccgccgccacgacc
ctgctcggcgacgccgagaagttcgccaaggccggcctgccgatgtgcctggtgatcgcc
ccgacccgcgagttggccatccaggtcaatcgcgaactggcctggctctatgccgacgcc
ggcgccgtggtcgtcaactgcgtggggggcatggacgcccgtcgcgagcagcgcgccctg
aacttcggcgcccatatcgtcgtcggcacccccggccgcctgcgcgaccacatcgagcgc
ggccacctggacctgtccgagctgaaggtcgccgtcctcgacgaggccgacgagatgctc
gacatgggcttccgcgaagacctggaattcatcctcgacgccgcgccgagcgaacgccgc
accctgctgttctcggccaccctggcgcgcgagatcgtgcaactggccaagagctaccag
aacgacgccctgcgcatcgacacggtcggccgcaacgaaccgcaccgcgacatcgaatac
cgcgccgtccgcgtcgcccccaacgaggtcgagcacgcggtcgtcaacctgctgcgctat
ttcgaaagccccggcgccctggtgttctgcaacacccgtgaaagcgtccgcgccctgcac
agcaagctgcgcgagcgcggcttcgccgtggtcggcctgtcgggcgaactgagccagcgt
gaacgcgccgacgccctgcaggcgctgcgcgacggccacgcccgcgtctgcgtcgccacc
gacgtcgccgcgcgcggtctcgacctgccggatctcggcctggtcatccacgccgaactg
ccggtcaacaaggcgacgcttctgcaccgttcgggccgcaccggccgggcgggcaagaag
ggcgtcagcgccctggtcgtcccctacacccgtcgccgcaaggccgagcagctgctgatg
gccgccggcgtcgaaggccactggggcggcgccccgaccgccgacgagatccgcctcaag
gacaccgagcgcctgctcgacgatccgatcttcgacgaggccgtagtcgaggaagacacc
gccctggccgaagcgatgctggccaagcgcacgccgctggagatcgccgccgccctgatc
cgcacccgccgcgccaagctgccggcgccggaagagatctatgacgacccgcgccacggc
gccgatccgggtccgcgttcgcgcgacgccggcccgcgctcgaacgacgccggcgaccgc
ttcgccgaccggggtccgcgcgactttggcggcgaccgtcccgaacgcgaaccgcggtcc
gacatggccaactcggcctggttccgcctcaacaccggccgtcgcaacaacgccgacccc
aagtggctgatcccgctgatctgccgcctgggccacatcaccaagaaggacatcggctcg
atccggatcttcgactacgacaccaagttcgagatctcggccgaggcggaagtgaagttc
ggggccgccgtccaggccaccgtgcgcgacgacgtgaccatcaccccgaccacggccccg
gccgcccgggacgcctcgggtccgcgcaaggactacgcgccccgtccgccgcgcgacgac
aacgacgcgccgcgccgcgaatatgcgccacggccgccccgcgacgacgccggtccgcgt
ggcccgcgcgccaatgcccccggctcgcgcgacagcagcccgcgtccgtcgtcctacagc
gccgacggcgtcagcaacgccaagccctacgcccgcggcgaagaacccaagcgtgactac
aagccgcgtgacgatggtcccaagcgtgacttcaagccgcgtccggccgctcgtgacgac
gctccgcgcgacttcaagccccgcgccccgcgcgacgaagcccccaaggcctattcgccg
ctgaacgaaggcccggccccacgccgcgccccgcgtgaagcgcgcgagagcgtcccctac
gatccggaagccaagccggccaaggcgccttacgtcgcccgtccccgcgacggcgcgccg
ggcggcaagccctatgccggcaagagcaatgatggtccggccaagccgttcaagggcccc
aagcccttcaaggccaagggcgcgtttggcgacaagccggcgttcggcggtcccaagccc
gccttcggcaagaagccggccggcggcaaggcgccgttcaagaagaagtag
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