Caloramator sp. E03: FDN13_05940
Help
Entry
FDN13_05940 CDS
T05994
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
cale
Caloramator sp. E03
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cale03021
]
FDN13_05940
Transcription machinery [BR:
cale03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FDN13_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
UPF0122
GerE
HTH_10
HTH_11
HTH_23
HTH_Tnp_ISL3
HTH_17
Phage_antitermQ
HTH_24
DUF2089
HTH_Tnp_4
Fe_dep_repress
HTH_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QCX33280
UniProt:
A0A5B7TIC7
LinkDB
All DBs
Position
complement(1182335..1182802)
Genome browser
AA seq
155 aa
AA seq
DB search
MSISEREFIEKITDYKQYLYKMAFLYVKDENSALEIIDETVFKAYLSYKKLRKSEHFKTW
ITKILINCAIDYLRDKKKICGNIDEVDVNIEEKEYVDLYNGINLLSGIQKSIIILKYFYD
FTIKEISEILNISDSTVKNNLHKALEFLRIQLREE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
ttgtctataagtgaaagggagtttatagaaaaaataactgattataagcagtatctttat
aaaatggcatttttatatgtaaaagatgagaatagtgcacttgaaataatagatgaaaca
gtctttaaagcttatttatcctataaaaagttgaggaaaagtgagcactttaaaacatgg
ataacaaaaatactgattaactgtgccatagattatttaagagataaaaagaaaatatgc
ggcaatatagatgaagttgacgttaatatagaagaaaaagaatatgtggacttatacaat
ggaataaatttattaagtggtattcaaaagagcataattatattgaaatatttttatgat
tttacaataaaagagatatcagaaatattaaacatatcagacagcacggttaaaaataac
cttcataaagccttagagtttttaagaattcaattgagggaggaatag
DBGET
integrated database retrieval system
