Calothrix sp. 336/3: IJ00_19985
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Entry
IJ00_19985 CDS
T03937
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
calh
Calothrix sp. 336/3
Pathway
calh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
calh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IJ00_19985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calh03400
]
IJ00_19985
DNA repair and recombination proteins [BR:
calh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IJ00_19985
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IJ00_19985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
AAA_16
AAA_19
UvrD-helicase
AAA_22
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AKG23252
UniProt:
A0A0T7BVU7
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Position
4816900..4818903
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AA seq
667 aa
AA seq
DB search
MDKFSLQAPFSPTGDQPQAIAQLLKSVNAGDRYQTLLGATGTGKTFTIASVIEKVGRPTL
VLAHNKTLAAQLCNELRDFFPKNAVEYFVSYYDYYQPEAYIPVTDTYIEKTASINEEIDM
LRHSATRSLFERRDVIVVASISCIYGLGMPAEYLKAAIPFQVGMEVNYREILKSLVAIQY
TRNDLEMTRGRFRVRGDVLEIAPAYEDRIVRVEFFGDEIDAIRYIDPVTGEIIQNLERIN
LYPARHFVTPVERLEIACNDITAELKEQKTQLETLGKLLEAQRIDQRTRYDIEMLSQVGY
CNGVENYSRHLAGRQAGEPPECLIDYFPNDWLLVIDESHVTVPQIRGMYNGDQARKKVLI
DHGFRLPSAADNRPLKAEEFWQKVNQCIFVSATPGEWEIEISQDNIAEQIIRPTGVIDPE
INVRPTEGQIDDLLGEIKDRVKLQERVLITTLTKRMAEDLTEYLEDNGIRVRYLHSEINS
IERIEIIQDLREGKFDVLVGVNLLREGLDLPEVSLVVILDADKEGFLRAERSLIQTIGRA
ARHIRGKAILYADNLTKSMVKAIDETERRRGIQTAYNQIHGITPQPIAKKKSSNAILSFL
EVSRRLNATDLQIVEEHLDEIPLENIPQLITQLESQMKEAAKKLQFEEAAKLRDRIKQLR
DKLVGRN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggataagttttctttacaagctccctttagtccgactggtgatcaaccgcaggcgatc
gcccaattattaaaaagtgtaaatgctggcgatcgctatcaaaccttgcttggtgctacg
ggaacaggtaaaacatttactattgcctcagtcatcgagaaagttggcagaccaacccta
gtccttgctcataataagactttagcggcacaattatgtaatgagttgcgggattttttc
ccaaaaaatgcggtggaatatttcgttagttattacgattattatcagccagaagcctat
atcccggtgactgatacctatattgaaaagacagcatcgattaatgaagaaattgatatg
ctgcgacattctgccacgcgatcgctgtttgaacgtcgggatgtgatagttgttgcttcc
attagctgtatctatggtttgggtatgcctgcggaatacctgaaagcagccattccgttt
caagttggtatggaagttaattacagagaaatactgaagtcattagtagcaattcaatat
acgcgcaatgatttagaaatgacacggggacgctttcgagttcggggagatgtgttagaa
attgctcctgcttatgaagatagaattgtccgtgtagagttttttggtgatgaaatcgac
gcaattcgctacatagatccagtcacgggagaaatcatccaaaatttagaaagaattaat
ttataccctgctcgccactttgtcaccccagtagagcgtctcgaaattgcctgcaacgat
atcaccgcagaactcaaagagcaaaaaacccaactagaaacattaggaaagcttttagaa
gcgcaacgtatcgaccaacgtacccgttatgatatcgaaatgttgagtcaggtaggttac
tgcaatggtgtagaaaattactcccgtcatttagcagggagacaagcaggagaaccaccg
gaatgtttaattgattatttccctaatgattggttattggtaatagatgaatctcatgtt
accgtacctcaaattcgaggaatgtacaatggcgatcaggctagaaagaaagtcttaatt
gaccatggttttcgtttacctagtgctgcggataatcgtcctttgaaagcagaagaattt
tggcagaaagttaatcaatgtatctttgtttctgctactcctggagagtgggaaattgaa
atatcccaagataatatagccgaacaaattattcgcccgacgggagtaattgacccagaa
attaatgttcgtcctacggaaggacaaattgatgatttgttaggggaaattaaagataga
gtcaaacttcaggaaagagttttgattacaactctcactaaacgtatggcagaagatttg
accgaatacttggaagataatgggattcgtgtcagatatttacactcagaaataaattct
attgaacgcatcgaaattatccaagatttacgagaaggtaaatttgatgtgttagtgggt
gtcaacttattacgggaaggtttagatttaccagaagtttcccttgtagtcattcttgat
gctgacaaagaaggttttctgcgtgcagaacgctcactgattcaaaccattggaagagct
gcccgtcatattcgtggtaaggcgattttatatgctgataatttgacaaaaagtatggtg
aaagccattgatgaaaccgaaagaagacgcggtattcaaacagcatataatcaaattcat
ggtattacaccccaacccattgctaagaaaaaatctagtaatgctattctttcattctta
gaagtttctcgacgcttaaatgctacggatttacagatagtagaagagcatttagatgag
attcctttagaaaatattccacagctaattactcagttagaatctcaaatgaaagaagct
gcaaaaaaattacagtttgaagaagccgcaaaattacgcgatagaattaagcagttacga
gacaaattagttggtcgaaattaa
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