Calothrix sp. PCC 6303: Cal6303_5090
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Entry
Cal6303_5090 CDS
T02372
Name
(GenBank) fimbrial biogenesis outer membrane usher protein
KO
K07347
outer membrane usher protein
Organism
calt
Calothrix sp. PCC 6303
Pathway
calt02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
calt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Cal6303_5090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
calt02000
]
Cal6303_5090
02044 Secretion system [BR:
calt02044
]
Cal6303_5090
02035 Bacterial motility proteins [BR:
calt02035
]
Cal6303_5090
Transporters [BR:
calt02000
]
Other transporters
Pores ion channels [TC:
1
]
Cal6303_5090
Secretion system [BR:
calt02044
]
Chaperone-usher system
Type 1 pilus assembly protein
Cal6303_5090
Bacterial motility proteins [BR:
calt02035
]
Pilus system
Fimbrial proteins
Cal6303_5090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
CarboxypepD_reg
TcfC
SdrD_B
CarbopepD_reg_2
SpaA
Motif
Other DBs
NCBI-ProteinID:
AFZ03979
UniProt:
K9V8E6
LinkDB
All DBs
Position
6119059..6121590
Genome browser
AA seq
843 aa
AA seq
DB search
MLSRRILLLISSLLLLVFTNTSAYTQIPADINTEKENEDKLFEKVFGRRQNNLQSVVAPF
FVDGQQRGETTLILTPGNVPNLRFQATAFLQEMVELIRPDIYQQIQGEIDKEGNLTLEAL
QQNGLEATFSDRTLELRIQIPPAQRKTKISDLRGNGVPPEAENAVKPSKVSAYLNLRGGQ
DFVWSGTSSTNLGRQPLNLQFDGAVNVNGWVLEGGGNFNEGTDNSWRRSDLRLVRDDPKS
SVRYVVGDVSTPTTGYQRSTPIIGFTAAKNFTLQPYRVTRPISQYEFFLERPSKVEVFVN
NRLVETLQLPAGKQDVRDLPLSVGTNDVQLTITDDLGRVSQLNFSSALASELLAPGLQKF
AYGIGFAAEQKNGVYSYNWEKPILSLSHHFGANKKLTVGGYFQGNTQQQVAGLEGIFATS
IGNLGWDVALSNASNLGSSYAMKLRYDFLKVGKNNPSQRTFNLSLEHRGANFMQFDDENP
KNKYSLGITAAYNQKLLSDINANLSLRYQLGRDETPDTHSINLGLSKYLRNGLGVNLNLS
QNRNNNGDNEQRVYMSLSWLKQLPSQSLRTTSEFSSEDSFSNRFSWNSNPLEPFGNLRGS
VEGVQKSGDYQLNTKLAYPGFRGNLELSHDFTRLGNGINTDSHRTRLNFGTAVVFADGNF
GLSRPIDNSFAIVVPHQNLRGKKIGVNPVGESYFAQIDGLGSAVLPSFQPYNVSSIKIDS
SQLPLGYDLGKENYNILPSYKSGVVIHVGTDATVFIKGKLILADGKPLSQKTAQVVSLLD
TKWQPITLFTNKAGKFALTGLKPGRYEIRFNEESLQKVSFEIPKNTAGLYDIGTLTFSSV
SSN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgctatctagacgtattcttctcttaattagcagtcttcttctattagtttttactaat
acatcagcatatactcagataccggcagatattaataccgaaaaagaaaatgaagataag
ctttttgaaaaagtttttggtagaagacaaaataatcttcaatctgttgtagctcctttt
tttgttgatggacaacaaaggggtgaaacaacacttatcttaactcctggaaatgttcca
aatctccgttttcaagcaaccgcatttctccaagaaatggtggaacttatccgtcctgat
atttatcaacaaattcaaggggaaatagataaagaaggcaatcttacattagaagcttta
caacaaaatgggcttgaagcaacatttagcgatcgcactttagaattacgcatccaaata
cctcctgcacaacgaaaaacaaagatttctgatcttcgaggcaatggtgtacctccagaa
gccgaaaatgcagtcaaaccaagcaaagttagtgcctatctcaatttacggggtgggcaa
gattttgtttggtctggtacttcatccacaaatctaggacgacaacctctgaacttgcaa
tttgatggtgcagttaatgttaatggatgggtattagaaggagggggtaatttcaacgaa
ggaacagataattcttggagacggagtgatctacgtttggtacgagatgatccaaaaagt
tctgtacgttatgttgtaggtgatgtttcaaccccaaccacaggctatcaaagaagcaca
ccaatcattggatttacggcagcgaaaaactttacattacaaccataccgtgtcacaaga
cccattagtcaatatgagtttttcttagaaagaccttcaaaagtagaagtatttgttaat
aatcgtttggttgaaacattacagttacctgcgggaaaacaagatgttcgtgatttacct
ctcagtgttggtactaatgatgttcaattgacaattacagatgatttgggtcgtgtttct
caacttaatttttccagtgctttagctagcgaattacttgcaccaggattacaaaaattt
gcttatggaattgggtttgctgctgaacaaaagaatggggtttatagttataactgggaa
aaaccaattctttctttatcccatcactttggtgctaacaaaaaattaacagttggagga
tatttccaaggcaatactcaacaacaagtagccggattagaagggatatttgcaacatct
attggtaatttaggatgggatgttgctttgagtaatgctagtaatcttggtagcagttat
gcaatgaaattacgttatgattttttaaaagttggtaaaaataatccctctcaacgtact
ttcaatctctcacttgaacatcgtggtgcaaattttatgcagtttgatgatgaaaatccc
aaaaataagtatagtttgggaattactgctgcatataatcaaaaattattgagtgatata
aatgctaatttgagcctgagatatcaattaggtagagatgagacaccagatacacattct
attaatcttggtttatctaaatacctcagaaatggcttgggtgtgaacttaaatctgagc
caaaaccgtaataataatggcgataatgaacaacgtgtttatatgagtttgtcatggtta
aagcaactaccatctcaatcattacgcacaacatcagaatttagtagcgaggatagtttt
agtaatcgttttagttggaattctaatcctttagaaccatttggtaatcttcgaggttca
gtagaaggagtacaaaagtcaggtgattatcagttaaatactaaattagcttatccagga
tttcgaggtaatcttgaactatctcatgattttacaagattaggtaatgggattaatact
gacagtcatcgaacacgcttaaattttggtactgctgttgtttttgctgatggtaatttt
ggtttatcacgtcctattgataacagctttgcgattgtagttcctcatcaaaatttaaga
ggaaaaaaaattggtgtcaatccagttggagagagttattttgctcagattgatggtttg
ggttcagctgtgcttcctagttttcaaccttataatgtttcgagtatcaaaattgatagt
tctcagttacccttaggatacgatttgggtaaagaaaattataatatattgcctagttat
aaaagtggtgttgttatacatgttggcacagatgcaactgtttttatcaaaggtaaatta
atcctcgcagatggtaaaccactttctcaaaaaactgctcaagtcgtatcacttttagat
acaaagtggcagccaataactttgtttaccaataaagcaggtaaatttgccttaacagga
ttaaaacctggacgttatgaaatccgtttcaatgaagaatcattacaaaaagttagtttt
gaaattcctaaaaatactgctggtttatatgatattggtacattaactttctcttccgtc
tcatctaactag
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