Cicer arietinum (chickpea): 101502894
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Entry
101502894 CDS
T02819
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03022
Basal transcription factors
cam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101502894
09124 Replication and repair
03420 Nucleotide excision repair
101502894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101502894
03400 DNA repair and recombination proteins [BR:
cam03400
]
101502894
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101502894
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101502894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
MetRS-N
Motif
Other DBs
NCBI-GeneID:
101502894
NCBI-ProteinID:
XP_004505045
UniProt:
A0A1S2YHW7
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Position
Ca6:16701443..16707359
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AA seq
451 aa
AA seq
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MPEVRIIAKNFMDMVASMPAIKLDKLYQNGFICEAILRSLPPLAKKYVLQLLHIDGPVSA
KLLEEWVLPDGLSKHKVAIDRLVQLRVFVEALDRKNEKTYKVNSTYQRSLQKLLVHGGTL
PRESMPSNITVRLPTLEDLETYALEQWECFLLQLISPSHVEKTLNISSSLMKVFQRRLLS
QRDKEAPKLTESGFQFLLMDTNAQLWYIIREYISNSEERGVDAGDLISFMLELSFHVIGE
AYNINTLTDFQRNIIKDLADLGLVKLQQGRKESWFIPTKLATNLSVSLTESSSRKEGFVV
VETNFRVYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYNALENGITAEQIVSFL
RQNAHPRVAQRIPAVPENVTDQIRLWESDLNRVEMTEAYYYDEFPSRDVFEGACDCAREW
NGLLWENSKKMHLVVKSEVHSYVRDFLRRQK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggttagaatcattgctaagaatttcatggacatggtggcttcaatgcctgcc
atcaagcttgataaactctaccagaatggattcatctgcgaagctattctcaggtctctt
ccgcctcttgcaaagaaatatgtgttacagctactgcatattgatggaccagtatcagct
aaattgttggaggaatgggtgcttccagatggactatcaaagcacaaagtcgccattgat
agattggttcaattgagagtttttgttgaagctcttgacaggaagaatgaaaaaacttac
aaagttaattcaacatatcagagaagtctccagaaacttttagtacatggtggaactttg
ccgagagaatcaatgccttctaatattactgtgaggctcccaaccttagaggatcttgag
acttatgctctggaacaatgggagtgtttcttgttgcaacttataagcccaagtcatgtt
gagaagacgttaaatataagttcttctttgatgaaagttttccagcggcgtctcctgagt
cagagagacaaagaagctccaaaattaactgaaagtggttttcagtttttgctgatggat
acaaatgcacagctttggtacatcatcagagaatatatctctaattccgaggaaagaggt
gttgatgcaggtgacttgatctcattcatgctggagcttagttttcatgtaattggggag
gcatataatataaacacattgaccgattttcagaggaacataattaaggacctggcagac
cttgggctggtcaaacttcaacagggcaggaaagaaagttggtttataccaacgaaattg
gccacaaacctttcagtgagcttgactgaatcatcatcaagaaaggagggatttgttgtt
gtggaaacaaatttccgagtttatgcttactcgacttcaaaattacattgtgagatattg
cggttattctcaagggtagagtatcaacttccgaatcttattgttggagctattacaaaa
gaaagcttgtataacgctttagaaaatggcattacagcagaacagatagtcagtttcctt
cggcagaatgctcatccccgtgttgcacagaggataccagctgtgcctgaaaatgtcaca
gatcagattcggctgtgggaatcagatctaaacagagttgagatgacagaagcatattat
tatgacgagtttccatccagggatgtatttgaaggcgcgtgtgactgcgccagagaatgg
aatggtttgttgtgggagaattcaaagaaaatgcatttggtggtcaagtctgaggtgcat
tcttatgtacgagattttttacgccgccaaaagtag
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integrated database retrieval system