Campylobacter sp. RM12175: CVIC12175_0772
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Entry
CVIC12175_0772 CDS
T05727
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
camz
Campylobacter sp. RM12175
Pathway
camz02020
Two-component system
camz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
camz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CVIC12175_0772 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CVIC12175_0772 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camz03021
]
CVIC12175_0772 (rpoN)
Transcription machinery [BR:
camz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CVIC12175_0772 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
GatB_Yqey
HTH_23
HTH_IclR
Clathrin
HTH_5
Calici_PP_N
HTH_36
MarR
KorB
Motif
Other DBs
NCBI-ProteinID:
ARR03901
LinkDB
All DBs
Position
738944..740182
Genome browser
AA seq
412 aa
AA seq
DB search
MKLSQKLTAKTKLNQTLRSWLPILQASSDELKETLEPFIEKNPFAQLDPNPKSRSLNFYN
DLYKTSISDTIESSIIYKESLYEKLYMQIDDRLFPSKKSKEIANLIIECINSEGYFEWDD
EIFTGFSKDEVERVRARFAYLEPVGVGAVDYKESFIFQLNELCDDDDIYELCVEIIKNFE
DISKFTKRKNYEAAMSLLKKFKNPPAIEYMDDEMLVIPDIFVYDSDGGIEVAINDEFYPN
IHIDIEGIDEKSEFVSSKIKEAKDLIDALEMRKSTLHKIGLMIIEYQYDYFFGGDIKPMK
LKDIAEDLGRNPSTISRAIQNKFLSSKRGIVPLKNFFAAAASQEVSNAAIKEFLLNLIKN
ENRAKPLSDEAILAKIEDEFNIKLVRRTITKYRKALNIASSSERKKLYAIQG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcaaaaactcactgctaaaactaaacttaatcagaccctgcgtagttgg
ttaccgattttgcaagcttctagcgatgagttaaaagagactttagagccatttattgag
aaaaatccttttgcccaacttgatccaaatcctaaaagtagatcgcttaatttttataac
gatctatataaaactagcataagcgatactatagaatcaagtataatttataaagagagt
ttatatgagaagctatatatgcaaattgatgatagattattcccatctaaaaaatccaaa
gagattgcaaatttgattatagagtgtattaatagtgagggttattttgagtgggatgat
gagatatttactggatttagtaaagatgaagtagaaagagtgcgcgctcgttttgcctat
ttggagcctgttggtgtgggtgcagtagattataaagagagctttatatttcaacttaat
gagctttgcgatgatgatgatatatatgagctttgtgttgaaattattaaaaattttgaa
gatattagcaaatttactaaacgcaaaaattatgaagctgctatgagcttactaaaaaaa
tttaaaaatcctccagctattgagtatatggatgatgagatgctagtaatacctgatata
tttgtctatgatagtgatggcgggattgaagtggctataaatgatgaattttatccaaat
attcatatagatattgaaggtatagatgaaaaaagtgaattcgtctcaagtaaaataaaa
gaggcaaaagatttaatagatgctttagagatgagaaaatcaacacttcataaaattggt
ttaatgataatagaatatcaatatgactatttctttggcggagatataaaaccaatgaaa
ttaaaagatatagcagaagatttaggtaggaatccatctaccataagtcgtgctatacaa
aataaatttttaagttcaaagcgtgggattgttccgcttaaaaacttctttgcagctgca
gcttctcaagaggtatcaaatgctgctattaaggaatttttattaaatttaattaaaaat
gaaaatagggctaagccgctaagcgatgaggcgattttggctaagattgaagatgaattt
aatatcaagctagttagaagaacaataaccaaatatagaaaagcattaaatatcgctagt
tcaagcgagcgtaaaaaattatatgcaatccaaggctga
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