Cyanobacterium aponinum: Cyan10605_1569
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Entry
Cyan10605_1569 CDS
T02376
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
can
Cyanobacterium aponinum
Pathway
can03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
can00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyan10605_1569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
can03021
]
Cyan10605_1569
03400 DNA repair and recombination proteins [BR:
can03400
]
Cyan10605_1569
Enzymes [BR:
can01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyan10605_1569
Transcription machinery [BR:
can03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyan10605_1569
DNA repair and recombination proteins [BR:
can03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyan10605_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RNA_pol_Rpb1_3
DUF3006
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
AFZ53678
UniProt:
K9Z5M6
LinkDB
All DBs
Position
1888841..1892680
Genome browser
AA seq
1279 aa
AA seq
DB search
MTSNQKETKNKTFYNKVIDKGGLKKLIAKTFTEQGSARCASVCDQLKTLGFRYATQAAVS
ISVEDLKIPPIKKEMLAEAESTIKNTLSRYANGEITEVERFQKVIDTWNDTSESLKDEVV
KNFRETDPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVT
EYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRENDCGTHRGIEVTPMKDGDR
ILIPLSDRLFGRVLAEDVIDPDTGEVIATRNQAIDDDLAKAIGKAVDKVKVRSPLTCETA
RSVCQKCYGWSLAHGDWVNMGEAIGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARRITT
PTSGTVKFSKKLKVRETRTRHGDQKLVVEVTGDVIVGAEKISVPKDSLLAVREGDVIQEN
DLIAEVMPQKTRSTEKVTKDVATDLSGEVHFADIAPESKTDKQGNTTTTASRNGLIWVLS
GQVYNLPPGAEPAVKNGDKVKPGSVLAETKLKTKSGGVCRFEEGSREIEIITASVSLDQA
DIYLEHHGSQQQYVIHTQKGDRFALKVVQGTKVQNNQVVAELIDDTYTTNTGGLIRYAGL
ETGRGNKKQGYEVIKEGTIVWIPEESHEINKDISLLLVEDGQYVEAGTEIVKDIFCQSSG
VVEVVQKNDILREIIVKPGQLYLDLDPDYLANIDEDNIIPPGTQIAPNNITEEEYFAQFV
DTNEGVGLLLRPIRQFEVINTTQSPSQESLNTQGSAINLKPVMRTFFKDGERVKSVEGVQ
LVTTQLVLETHEGMSADIELVPHEAEEGCFRLQIVVLESVLLRRELETEPNIITRVLVED
GQEIAPGDVVGTTQILCQEEGIIQGVREGVEAIRRVLVVRKSDMIDIQTESKPTCKAGDF
VTQGDLLAENITSPESGKVLKVEDNRVVLRYARPYRVSAGAILHIEQGDLVQRGDNLVLL
VFERAKTGDIVQGLPRIEELLEARKPKEPALLARRPGFCQVEYRDDEAIDVKVIEDDGTI
TEYPLSPNQNIIVNDNQRVETGDPLTDGLASPHELLEIFYAYYQEQEDNQGMFECALAAL
EKAQLFLVNQVQGVYQSQGIDISDKHIEVIVRQMTSKVRVDDGGDTIRLPGELVELRQIE
KDNETMSITGGAPVQYTPLIMGITKSSLNTDSFISAASFQETTRVLTEAAIEGKNDWLRG
LKENVIIGRLIPAGTGFNAYERQDWEGNDVVREVNGNDYALMDESNRLSSSLTDDEDVII
DDQSARTYSPDSMIIDDDE
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaatcagaaagagactaaaaataaaactttctataataaagtaatcgataaa
gggggcttaaaaaagctaatcgctaaaacttttaccgaacaaggttctgcccgttgtgct
tctgtttgtgaccagttaaaaactttgggtttccgttatgcgactcaagcggcggtttct
attagtgtggaagatttgaaaattcctcctatcaaaaaagaaatgttagcagaggctgag
tccaccatcaaaaatactctcagtcgttatgctaatggtgaaattactgaagttgaacgt
ttccagaaggtaatcgatacttggaatgatacttctgaatctttgaaagatgaagtagtc
aaaaatttccgtgaaactgatcctcttaactctgtctatatgatggcgttttctggggcg
aggggaaatatctctcaggtacgtcagttggttggtatgcgcggcttaatggctgatcct
caaggagaaatcattgacttacccattaaaactaatttccgtgaaggtttaaccgttact
gaatatattatttcttcttatggcgctcgtaaaggtttagtagataccgctttgcgtacc
gcagactctggttatttaacccgtcgtttagtggatgtttctcaggatgtaattattcgg
gaaaatgattgtggtactcaccgaggtatcgaagttactcccatgaaagacggcgatcgc
attttgattcctttatctgatcgtttatttggaagagtattagcagaagatgtgattgat
cctgacacaggggaagttattgctacccgtaatcaagccattgatgatgatttagcaaaa
gccattggcaaggcggttgataaagtaaaagtaagatctcctttaacctgcgagaccgct
cgttcggtgtgtcaaaaatgctatggatggtcattggctcacggtgactgggtaaatatg
ggagaagcgatcgggattattgccgctcaatctattggtgaacccggtactcagttaacc
atgcgaactttccacacaggaggagtatttactggggaagttgctcgtcgtattactact
ccaacctctggtacggttaaattcagcaagaaattaaaagtccgtgaaactcgtacccgt
catggagatcagaaattagttgttgaggtaacaggggatgttatcgttggtgctgaaaaa
atttctgtacccaaagatagtttattagcggtcagagaaggggatgtaattcaagagaat
gacctcattgctgaagtaatgccccaaaaaaccagatccacagagaaagtaactaaagac
gttgctacagacttatctggagaagtgcattttgcagatattgcccctgaaagtaaaacc
gataaacagggtaatactactacaaccgcctctcgtaatggtttgatttgggtgttatcg
ggacaggtttacaatttaccccccggtgccgaacctgcagtgaaaaatggtgacaaagtt
aagcccggttctgtattagcggaaaccaagttaaaaacaaaaagtggtggtgtttgccgt
tttgaagaaggtagccgagaaatcgaaattattactgcttccgtttctttggatcaggca
gatatttatctcgaacatcatggtagtcaacaacaatacgttattcacacccaaaaaggc
gatcgcttcgctttaaaagtagttcagggtacaaaagtacaaaataatcaggttgttgct
gaattaattgatgatacctataccactaacactggagggttaattcgctatgcagggtta
gaaacagggcgaggtaacaaaaaacaaggttatgaggtaatcaaagagggaactattgtc
tggattcctgaagaaagtcacgaaattaataaagacatctccttgttattagtagaagat
ggtcaatatgtagaagcaggaacagaaattgttaaagatattttctgtcagtctagtggg
gtggttgaggttgttcagaaaaatgatattttgagagaaattatcgttaaaccgggtcaa
ctataccttgacttagatcctgactatttagctaatatcgacgaagataatattattcct
ccgggtactcaaattgctcctaataatattactgaggaagaatactttgcccaatttgtt
gataccaatgaaggggttggtttattattacgtcctatcagacaatttgaagtaatcaat
actactcaatctccttcccaagaatcattgaatactcaaggttcagctattaacttaaaa
cccgtaatgcgtactttcttcaaagatggagaaagagttaaaagtgttgaaggagtacag
ttagttaccactcaattagtactagaaacccatgagggcatgagtgcggatattgagtta
gttccccacgaagccgaagaaggttgtttccgcttacaaattgtggtattagaatccgtc
cttttacgtcgtgaattggaaacagaacccaatattatcactcgtgttttagtggaggat
ggacaagaaattgctccgggagatgtagttggtacaactcaaattctctgtcaagaggaa
ggtattattcaaggggtaagagaaggggttgaagcaatccgtcgtgtgttagtggtcaga
aaatctgacatgattgatatacaaactgagtctaagcctacttgtaaggcaggagatttt
gtcactcaaggggatctattagcggaaaatataacttctcctgaatcaggtaaagttctg
aaagtggaagataatcgagtagtcttacgttatgctcgtccttatcgtgtgtctgcgggt
gcgattttacatattgagcaaggggatttagttcaacggggtgataatttagtattactc
gtatttgaacgggcaaaaacaggggacatcgttcaaggtttaccaagaattgaagaatta
ctcgaagcgcgtaaacccaaagaacctgccttgttagcacgtcgccccggcttctgtcaa
gtggaatatcgtgatgatgaagcgatcgatgttaaggtaattgaggatgatggtactatt
actgagtatcctttgagtcctaaccaaaacattatcgtgaatgacaatcaaagagtggaa
acgggcgatcctttaactgatggtttagctagtcctcatgaattactggaaatcttctat
gcctactatcaagagcaagaggataatcaaggaatgtttgagtgtgctttagcggcatta
gaaaaggctcaactatttttggttaatcaggttcaaggggtatatcaatctcaaggtatc
gacatttctgataaacatattgaggtgattgtgcgtcagatgacttctaaagtaagagtt
gatgacggtggtgatactatccgtttacctggggagttagtggaattgcgtcaaattgaa
aaagacaatgaaaccatgtctatcactggcggcgcacctgtacaatatactcctttgatt
atgggtatcactaaatccagcttgaatactgatagctttatctcagcggcaagtttccaa
gaaacaacaagggtacttacagaagctgcgatcgagggtaaaaatgattggttaagaggt
ttgaaagaaaacgtaatcattgggcgtttaattcctgcgggtactggcttcaatgcttat
gaacgtcaggattgggaaggaaacgacgttgtcagagaggtaaatggtaatgattatgct
cttatggacgaaagtaatcgcttatcttcttctcttacggatgatgaagatgtaattatt
gatgatcagtctgctcgtacttattctcctgacagtatgattattgatgatgatgagtaa
DBGET
integrated database retrieval system
