KEGG   Caldilinea aerophila: CLDAP_20190
Entry
CLDAP_20190       CDS       T01797                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cap  Caldilinea aerophila
Brite
KEGG Orthology (KO) [BR:cap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cap02048]
    CLDAP_20190 (hsdR)
Enzymes [BR:cap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     CLDAP_20190 (hsdR)
Prokaryotic defense system [BR:cap02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   CLDAP_20190 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII GrpE HSDR_N_2
Other DBs
NCBI-ProteinID: BAM00059
UniProt: I0I471
LinkDB
Position
complement(2536428..2539430)
AA seq 1000 aa
MTLSSERHVVQKSLIRYAEEAGWTYLPPEGAKNFSPLLRHGPDQPFLQDVLIAQLQRLNP
GVVTSAEQAAEVIARLMRLRPDIEGNREAWEYLKGLKTVFVQAERRERNLRLLDPEQVEV
NTFHVTDEFRFHSGPNKIRADVVFLVNGIPVILVETKAATRLEGIAEAFDQVRRYHLEAP
DLLVQTQLFALTHLVQFFYGATWSLSRKALFNWRDDIGAKYISPQPDFETLVKSFIAPRR
VLRVLTDYILFSRKDGELSKIVLRPHQMRAVERCLVRAREAVRAQRAAPQRRRGLVWHTQ
GSGKTYTMLTLSRLLLETPAFQNPTVLLIVDRNELQSQLFQNLEAIGFGKVHLALSKRHL
RDLLKSDTRGLILSMIHKFDDMPANLNPRANIFVLVDEAHRTTGGGLGNYLMGALPNATF
LGFTGTPIDRTAHGRGTFKTFGADDPQGYLDKYSIRESIEDGTTVPLHYQLAPNDLIADR
EAMEKDFWAAAELEGVADVEELNRVLDRAVTLTNMLKNRERVDQIARFVAGHFQNYVAPM
GYKAFLVAVDREACCFYKEALDRYLPPEASAVVISAGHNDPPHLKRYHLSDDEEARIRKA
FRKPDENPQILIVTEKLLTGYDAPILYCMYLDKPMRDHVLLQAIARVNRPYESEDGQRKT
TGLIVDFVGVFENLERALAFDSKDVSGVVEGLEVLQARFTELMEQGRREYGMITTEKTES
TEKNSVFSVPSVVNDKTAEAVLEHFRDRERREAFYTFFRELQEIYEILSPDPFLRPFLKD
YERLVEMYRLVRSAYEPHVPVDKSFLRKTAEIVQQHTVTSAIKEPQATYEIGPAALLALL
HEDRPDTVKVFNLLKALNRIVAEQGKTAPHLIPIGERAEEIRRRFEERLISAQEALQDLD
EIVRQLQAAQEECRSSPLSPQAFAVEWWLRTQGVEAEKAAQTAASLEEAFALFPNWLISV
ADERELRTRLYKALVAVTTNVEEVIPWANRILDLLRRAAE
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgaccctctcatccgaacgccacgtcgtccaaaaatcactcatccgctacgctgaagag
gctggctggacctacctgccgcccgaaggggcgaaaaatttttcgccccttctgcgccac
ggacccgaccagccgttcctgcaggatgtgctgatcgcccagttacagcgactgaacccc
ggcgttgtgacctccgcggaacaggctgccgaggtcatcgcccgcctgatgcgcctccgc
cccgacatcgagggcaatcgcgaggcctgggaatatctcaaagggctgaaaaccgtcttc
gtccaggcggaacgccgcgagcgcaacctgcgcctgctcgacccggagcaggtcgaggtc
aacaccttccacgtcaccgacgaattccgcttccacagcggcccgaacaaaatccgcgcc
gatgtggtcttcctggtcaacggcatccccgtcatcctggtcgagaccaaagccgccacc
cggctggagggcatcgccgaagccttcgatcaggtgcgccgctatcacctcgaagcgccc
gacctgctggtgcaaacgcaactcttcgccctcacccacctggtgcagttcttctacggc
gccacctggtcgctttcgcgcaaggcgctcttcaattggcgggatgatataggggcgaaa
tatatttcgccccaacctgattttgaaacgctggtcaaatccttcatcgccccgcgccgc
gtcctgcgcgtgctgaccgattacattctcttctcccgcaaggacggcgaactctccaag
atcgtcttgcgcccgcaccagatgcgcgccgtggagcggtgtctggtgcgcgcccgcgaa
gcggtaagggcgcagcgcgctgcgccccaacgacgccgcggcctggtctggcacacgcaa
ggctccggcaagacctacaccatgcttaccctgtctcgcctgctgctcgaaacacctgcc
ttccagaaccccaccgtcctgctcatcgtggaccgcaacgagctgcaaagccagctcttc
cagaacctggaagcgatcggcttcgggaaggtgcacctggcgctctccaaacgtcacctg
cgcgacctgctcaagagcgatacgcgcggcctgatcctctcgatgatccacaaattcgac
gacatgccggccaacctgaacccccgcgccaacatcttcgtgctggtggatgaagcccat
cgcaccaccggcgggggtctcggcaactacctgatgggcgcgctgcccaacgccaccttc
ctcggcttcaccggcacgcccattgaccgcaccgcccatggccgcggtaccttcaagacc
ttcggcgccgacgatccccaggggtatctcgacaaatactccatccgcgaatccatcgaa
gacggcaccaccgttccgctgcactatcaactggcgcccaacgacctgatcgccgaccgc
gaggcgatggaaaaggacttctgggcggcggcagaactggagggcgtggccgacgtggag
gaactcaaccgcgtcctcgaccgcgccgtcaccctgaccaacatgctcaaaaaccgcgaa
cgggtggaccaaatcgcccgcttcgtcgccgggcatttccagaactacgtcgccccgatg
ggctacaaggccttcctggtggcggtggaccgcgaggcgtgctgtttctacaaagaagcc
ctcgaccgttacctgccgcccgaagccagcgcggtggtcatcagcgccgggcacaacgac
ccgcctcatctcaagcgctaccacctgagcgatgatgaggaagcacgcatccgcaaagcc
ttccgcaagccggacgagaacccacagatcctcatcgtcacggaaaaactgctcacgggc
tacgatgcgcccatcctctactgcatgtatctcgacaaacccatgcgcgaccacgtgctg
ctgcaagccattgcccgcgtcaaccgcccttacgaaagtgaagatgggcagcgcaagacc
accggcctgatcgtggacttcgtcggcgtcttcgagaacctggagcgggcgctggccttt
gactcaaaggatgtcagcggcgtggtggaggggctggaggtcttgcaggcgcgcttcacc
gaattgatggagcaagggagaagagagtacgggatgatcaccacggagaagacagagagc
acggagaaaaactctgtgttctctgtgccctctgtggtaaatgacaaaactgccgaagcc
gtgctggaacacttccgcgacagggagcgccgcgaagccttctacactttcttccgcgag
ttacaggaaatttacgaaatcctctcccccgatcccttcctgcgccccttcctgaaggat
tacgagcgactggtcgagatgtaccgcctggtgcgcagcgcctacgagccgcacgtgccg
gtggacaaatctttcctgcgcaagacggccgagatcgtccagcagcataccgtcacttcc
gccatcaaggagccccaggccacctacgaaatcgggccggcggcgctgctggccctgctc
cacgaggacaggcccgatacggtcaaggtcttcaacctgctcaaagcgttgaatcgcatc
gtcgccgaacagggaaagaccgcgccgcatctcatccccatcggcgagcgggcggaagag
atccgccgccgctttgaggagcgcctcatctcggcccaggaggcgctgcaagatctggac
gagatcgtgcggcaactgcaggcagcgcaggaggaatgtcgatccagtccgctttcgccg
caggcctttgccgtcgagtggtggctgcgcacccagggcgtagaggcggaaaaggccgcc
cagactgcggcctcgctggaagaagccttcgccctcttcccgaactggctcatcagcgtc
gccgatgagcgcgaactgcgcacccgcctgtacaaagctctggtagcggtaaccacgaac
gttgaagaagtcatcccctgggcgaatcgcatcctcgacctgctgcggagggctgctgaa
tga

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