KEGG   Capnocytophaga endodontalis: CBG49_04585
Entry
CBG49_04585       CDS       T04940                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
capn  Capnocytophaga endodontalis
Pathway
capn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:capn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBG49_04585 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:capn03019]
    CBG49_04585 (rny)
Messenger RNA biogenesis [BR:capn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CBG49_04585 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH Sigma_reg_N KH_2
Other DBs
NCBI-ProteinID: ASF42411
UniProt: A0A1Z4BM92
LinkDB
Position
960198..961766
AA seq 522 aa
MDSTVIISIAVFIIALAIGFAIAKVLEKKNASKIILNAQNEADVLLKNAKVEGENIKKDK
IFQAKEKFLELKAEHEKTIAAKDKKMAEAEKRIRDKESQVSNELAQNKRLKDELEKKTEE
VDFRLQTLDKKQEEIERLHKSQVQQLEVISGLSAEEAKKQLTDSLRSEAQADAMAYIQNT
IEEAKLTAHQEARKIIINTIQRIGTEEAVDNCVSVFNLESDEVKGRIIGREGRNIRALEA
ATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEEE
IVEIGKRTVIDLGIHGLHPELVKCVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNP
KLAKRAGLLHDIGKVPQVETETPHALLGMEWAEKYGEKPEVCNAIGAHHDEIEMTSLLSP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEDAAFTFQGVKKAYAIQAGRELRVIVESEK
VTDDKAAELSFNLSQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatagtacagttattataagtattgcagtttttattatcgcccttgccatagggttt
gctatcgccaaagtgctggaaaagaagaacgcctctaaaattattctcaacgctcagaat
gaagccgacgttcttctaaaaaatgctaaagttgaaggcgaaaacattaaaaaagacaaa
atcttccaagctaaagaaaagttcctcgaactaaaagccgaacacgaaaaaacaatcgct
gccaaagataaaaaaatggcagaggctgaaaaacgtatccgtgataaagaatcacaagta
tccaatgaattagctcaaaacaaacgcctgaaagacgagttggaaaagaaaactgaagaa
gttgatttccgcctccaaactctcgacaaaaaacaagaagaaatcgaacgtttacacaaa
agccaagtgcaacaactcgaagttatctccggactctccgccgaagaagctaaaaaacaa
ctcaccgactctcttcgcagtgaggctcaagccgatgcaatggcatatatccaaaatacc
attgaggaagctaaactcaccgctcatcaagaagctcgaaaaatcatcattaataccata
caacgtataggcactgaggaagcagtagacaactgtgtatcagtattcaacctcgaatcc
gatgaagtgaaaggtcgcatcatcggtcgtgaaggtcgcaacatccgcgcccttgaagcc
gctaccggggtcgaaattattgtagatgatacccccgaagcgattatcctctcttgcttc
gattcagtacgccgcgaaattgcacgcctctcattgcacaaactcgtaaccgatggtcgt
atccaccctgcacgtattgaggaagtagttgaaaaaactaccaaacaaatagaagaagaa
atcgttgaaataggaaaacgcaccgtaatcgacctcggtatccacggattacaccccgaa
ttggtgaaatgtgtgggacgtatgaaataccgttcttcttatggtcaaaacctcttacaa
cactcacgcgaggtagccaaactttgcggggtaatggcagccgaattaggcttgaaccct
aaactcgccaaacgtgccggacttttgcacgacataggtaaagtgccacaagtggaaacc
gaaacccctcacgcgctcctcggtatggaatgggcagagaaatatggtgaaaaacccgaa
gtgtgcaacgctattggggctcaccacgacgaaatagaaatgacttcattgctttcacct
atcgtacaagtatgcgatgctatcagtggagcacgtccaggagcacgtcgccaagtactc
gattcgtacattcaacgtctcaaagacctcgaagatgcagccttcactttccaaggtgtg
aaaaaagcttatgctattcaagcgggtcgtgagttacgcgtaatcgtagaaagcgaaaaa
gtaaccgatgataaagccgcagaactatcattcaacttatcacaaaaaatccaaactgat
atgacctacccaggtcaagtgaaagtaacggtaatccgtgaaactcgtgctgtgaatatc
gcaaaatag

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