Candidatus Paracaedimonas acanthamoebae: IM40_02865
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Entry
IM40_02865 CDS
T03240
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq00470
D-Amino acid metabolism
caq00550
Peptidoglycan biosynthesis
caq01100
Metabolic pathways
caq01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IM40_02865
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IM40_02865
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IM40_02865
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caq01011
]
IM40_02865
Enzymes [BR:
caq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
IM40_02865
Peptidoglycan biosynthesis and degradation proteins [BR:
caq01011
]
Precursor biosynthesis
Amino acid ligase
IM40_02865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
RimK
ATP-grasp
ATPgrasp_ST
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
AIL12700
LinkDB
All DBs
Position
549814..550731
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AA seq
305 aa
AA seq
DB search
MKKRVAVLMGGWNGERDVSLSSGRGVVTALQERGYDVVPIELTRNLPSLLELLDPKPDVL
FMCALHGKWVEDGCLQGMLEIMGIPYTNSSPLASALAMDKPMALRMFREAEIPCPDGKVV
KLTDLLKGDILSFPYVIKPLREGSSLGVHIIHNRKDLLKAEETWQYGDQCLVEPYIPGRE
IQVAILGDRAIGAIEIRPKEGFYDYNAKYIDGYTEHIMPAGIPEKDYQKALELSLKAHRT
LGCEGVTRVDLRYDDTQNPAKFYVLEVNTQPGLTPLSLVPEIAAYHGMNYGDLLEWMIEN
PRCPH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagagttgccgtcttgatgggcggatggaatggggagcgcgatgtatcttta
tcgagtggtcgtggggttgtcacggctttgcaagaacgaggatatgatgttgttcctatt
gaactgactcgtaatttaccttccctccttgagttgctggatcctaagcctgatgttctt
tttatgtgtgctctccatgggaagtgggttgaggatggctgtttgcaaggtatgcttgaa
atcatgggcatcccttatacaaattcaagtcctttggcatcagcccttgcgatggacaag
ccgatggctttaagaatgtttcgagaggctgaaattccctgtccagacggaaaagtagta
aaattaacagatcttctgaaaggggacattttatcttttccttatgtgattaaacctctt
cgagaaggttcaagtttaggggtacatattattcacaatagaaaagatctcttaaaagct
gaagaaacatggcaatatggtgatcaatgcttggtagagccctatattcctggtcgagaa
attcaagtggcaattctaggtgaccgtgcgataggcgctattgagatccggccaaaagag
ggtttttatgattacaatgcaaagtatattgacggttataccgaacatatcatgcctgca
ggaatccctgaaaaagattatcaaaaagctttagaattaagcctaaaagcacatagaacg
ctagggtgcgagggtgtgacgagagtagacctacgatacgatgatacgcaaaatcctgct
aaattttatgttcttgaggttaacacccaacctgggttgacgcctttatcattagtgcct
gaaattgcggcatatcatgggatgaattatggagacttattagaatggatgatcgaaaat
ccacgatgtcctcattaa
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