Candidatus Paracaedimonas acanthamoebae: IM40_04215
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Entry
IM40_04215 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caq02000
]
IM40_04215
Transporters [BR:
caq02000
]
Other transporters
Pores ion channels [TC:
1
]
IM40_04215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AIL12895
LinkDB
All DBs
Position
809288..811447
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AA seq
719 aa
AA seq
DB search
MKKWFRTFFCLTFFCLILNGFTSVNADVSDFENLKPDQKPKDVETDALEKLLKTLESKSA
RKEFISQLRTMIAARSKVENEPTPLALSKISEIIHSISEKILEFFSAFERSFTEVIKHFN
DPSFRTKMVYVLKNIFLVLGLGIVINRSIRWISYYAYKRLKNTTPQTIISTRKIKLIQRT
INGFAVISMIVVMFTFASSLPLYEITIPIIYLSMNSLASYEAALFLYQLIFSPKWKELRL
ISINDSTAQLSYCYLRLVTFLMIIGIALSELILLLKGPVIFYSFIIKAMLFISCFKTLWF
IYVIRNRVSQWLVRQEQSINRNRLFSSTVAKTWHVWASLYMCLFGITIFFQRINNVKAVA
FSFIGTAFLITVSYILVLKIPKFVRTFMEHVACHLPYVTPRKNFYTVFLSLLISLSIVFS
LLFLSLEIWDLEVFDFFSQVEGLPSAFLNILLILLLSIFVWETNEYVIDRFFNRSTKQQK
GRVRKQRLLTIKPLVQNTTRFILFALVALIIFAEFNLDITPLLAGVGVIGIAFSFGSQSL
VKDIITGIFILVEDTINVGDIVQIDGQNGNVEAISLRTVRLRDSEGNLHTIPFSGITKIT
NMSKNFSYYLFQIGLSYSENIDHAFEAMKEVDLEMCHDIKYSTMILEPLEIMGVDKFTET
GVILQARIKTLPDKSRWIVGREFNRRLKDKFDQKSIEFAYEYRGYELLSTQAISSVSKV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtggtttaggacgtttttttgtcttacttttttttgtttgatactaaatggt
tttacttcagtgaacgcagatgtttctgactttgaaaatttgaagcctgatcaaaagcca
aaagatgttgagactgatgctttagaaaaattattaaaaacacttgaaagcaagagtgct
cgtaaagaatttatttcacaacttcgaacaatgattgcggcaagatcgaaagttgaaaac
gaacctactcctttagcgctttcaaagatttcagagataattcattctatctcagagaaa
attcttgaattttttagtgcatttgaaaggtcttttacggaagttatcaagcatttcaat
gatccatcttttaggacaaaaatggtttatgtccttaagaatattttccttgttttagga
ctaggtatagttatcaatagaagtattcgttggataagttactatgcttataagcgtctt
aaaaacaccactcctcaaacaattatttcaacaagaaaaataaaacttattcaaagaaca
attaatggctttgctgtcatcagtatgatagtcgtaatgtttacatttgcttccagttta
cccctttatgaaattacgattccaattatatatctttcaatgaactcattggcaagttat
gaagctgctctttttctttatcaattaattttttcgccaaaatggaaagagcttcgttta
atcagcattaatgactccacagctcaacttagctattgttatttgcggttagttacattt
cttatgattataggcattgctcttagcgaacttattttactattaaaaggtcctgtaatt
ttttactcttttattattaaggcaatgctttttatctcttgctttaaaacattatggttt
atttatgtaattcgaaatcgagtaagtcaatggctagtacgtcaagaacaaagtatcaat
cgcaacagattattctcctcaactgttgcaaaaacttggcatgtatgggcaagcttgtat
atgtgtctctttggaatcacaattttttttcaaagaattaacaatgttaaagctgttgct
ttttcattcattggtacggcatttctaattactgtttcatatattttagtcttaaaaatt
cctaagtttgtacgaactttcatggaacatgtagcgtgtcatctaccctacgtaacccca
agaaagaatttttatactgtttttctttcccttctgattagcctaagcattgtctttagt
cttctttttttatcattagaaatttgggatcttgaagtatttgatttcttttcacaagtt
gaggggttaccttctgcatttttaaatattttattaattttgctcttaagtatttttgta
tgggaaactaatgagtacgttatagatcgtttttttaaccgttctacaaaacaacaaaaa
ggtagagtcagaaagcaaaggcttttaacgattaaacctctcgtccaaaataccacccga
tttattttatttgcacttgtagctttgattatatttgctgagtttaacttagatattacg
cctctcttggctggtgttggtgttattggtattgctttcagctttggtagtcaatcttta
gttaaagacattatcacgggcatttttatcttagttgaggatacaataaatgtcggagat
attgttcagattgatggtcagaatgggaatgtggaagctatttctctaagaacagttcgg
ttgcgcgattctgaaggaaacttacatacaattccgttcagtgggattacgaaaattact
aacatgtctaagaacttctcttattacctttttcaaatagggctttcatactctgaaaat
atagatcatgcttttgaggctatgaaagaagtagacctagagatgtgtcatgatattaag
tacagtacgatgattttagaacctttagagattatgggagtagataaatttactgagaca
ggcgtcattctacaagctcgcattaagacgcttcctgataaaagccgctggattgtggga
cgagagtttaaccgtcgtttaaaagataaatttgatcaaaaaagtattgaatttgcttat
gaatatagaggatatgagttgctatctacacaagcaatatcatcagtatcaaaagtttaa
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