Corynebacterium aurimucosum: cauri_0368
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Entry
cauri_0368 CDS
T00887
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
car
Corynebacterium aurimucosum
Pathway
car03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
car00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
cauri_0368 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
car03021
]
cauri_0368 (rpoB)
03400 DNA repair and recombination proteins [BR:
car03400
]
cauri_0368 (rpoB)
Enzymes [BR:
car01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
cauri_0368 (rpoB)
Transcription machinery [BR:
car03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
cauri_0368 (rpoB)
DNA repair and recombination proteins [BR:
car03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
cauri_0368 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ACP31967
UniProt:
C3PKN1
LinkDB
All DBs
Position
404131..407610
Genome browser
AA seq
1159 aa
AA seq
DB search
MAVSRQTKSVANIPGAPKRYSFAKISEPIAVPGLLDLQLDSYAWLIGTPEWREREQAERG
EDARVTSGLEDILEELSPIQDYSGNMSLSLSEPRFEPVKNTVDECKEKDINYSAPLYVTA
EFINNDTQEIKSQTVFIGDFPMMTEKGTFIVNGTERVIVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTEEQIKERFGFSEL
MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQALLDNSFFRAKRYDLAKVGRYKVN
RKLGLGGDHDGLMTLTEEDIAVTLEYLVRLHAGEREMKAPNGEMISIHTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNAFGFIETPYRKVVDGKVTDQVEYLTADEEDRFAIAQAEVEKDADGTLTGDR
IEVRLKDGDIGVTDASGVDYVDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPYVGTGMEQRAAYDAGDLIITPKAGVVENVTADLITIMDDEGQRDTYMLRKFERT
NQNTNYNQTPLVSLGERVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRIVEEDILTSIHIEEHEIDARDTKLGPEEITREIPNVSDDVLRDLDERGIVRIGADVRA
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVSRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPPEDMPFMEDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAHAGWKIDTEDPANAELLKTLPEELYDVPPESLTATPVF
DGATNEEISRLLASSKPNRDGDVMVDEHGKARLFDGRSGEPYMYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSTDGTPMELSGSDDDDMDG
APSLGINLSRDERSDADIA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccaacatccctggagccccgaagcgatac
tccttcgctaaaatcagcgagcctatcgccgtcccgggcctcctcgatctacaactcgat
tcttacgcgtggctcatcggcacccccgagtggcgcgagcgcgagcaggcagagcgcggc
gaagacgcacgcgtgacgagcggccttgaggatatcctcgaggagctttctccgatccag
gattactcgggcaacatgtccctgtccctgtcggagcctcgcttcgagccggtgaagaac
accgtggacgagtgcaaagagaaggacatcaactactcggcgccactgtacgtcaccgca
gaattcatcaataacgacacccaggagattaagtcccagaccgtcttcatcggcgatttc
ccgatgatgaccgagaagggcaccttcatcgtcaacggcaccgagcgcgttatcgtttcg
cagctcgtgcgttccccgggtgtctacttcgaccagaccatcgacaagtccaccgagcgc
cctctgcactccgtgaaggtcattccttcccgcggtgcatggttggagtttgacgtcgac
aagcgcgacaccgtcggcgttcgtatcgaccgcaagcgccgccagccggtgaccgtgctg
ctcaaggccctgggttggaccgaggagcagattaaggagcgcttcggtttctccgagctc
atgatgtccaccctcgagtccgatggcgtggccaacaccgatgaggctctgctggagatt
taccgcaagcagcgcccgggcgagcagcccacgcgtgacctcgcgcaggcactgctggat
aactccttcttccgcgccaagcgctatgacctggccaaggtgggccgctacaaggtcaac
cgcaagctcggcctgggcggagaccacgacggtctgatgaccctgaccgaggaagacatc
gccgtcaccctcgagtacctcgtgcgcctgcacgccggcgagcgtgagatgaaggccccg
aacggtgagatgatttccatccacaccgacgacattgaccactttggtaaccgtcgtctg
cgcaccgtcggcgagctcatccagaaccaggtccgcgtgggcctgtcccgcatggagcgc
gtcgtccgcgagcgcatgaccacccaggatgcagagtcgattaccccgacctccctgatt
aacgttcgcccggtttctgctgccatccgcgagttcttcggtacctcccagctctcgcag
ttcatggaccagaacaactccctgtccggcctgactcacaagcgccgcctgtctgcgctg
ggcccgggcggtctgtcccgtgagcgcgccggcattgaggtgcgagacgttcacgcttcg
cactacggccgcatgtgcccgattgagaccccggaaggcccgaacattggcctgatcggc
tcgctggcttcctacgctcgcgtgaacgctttcggcttcatcgagaccccgtaccgcaag
gttgtggacggcaaggtcaccgaccaggtggagtacctcaccgccgatgaagaggatcgc
ttcgctatcgcgcaggccgaggttgagaaggatgccgacggcaccctgaccggcgaccgc
atcgaagtccgcctcaaggatggcgatatcggtgtgaccgacgcctccggcgtggactac
gtcgacgtgtccccgcgccagatggtctccgtggcaaccgccatgattccgttcctcgag
cacgacgatgctaaccgtgccctcatgggtgcgaacatgcagcgccaggccgtgccgctg
gtgcgctccgaggccccgtacgtgggcaccggtatggagcagcgcgctgcctacgatgct
ggtgacctcatcatcaccccgaaggcgggcgtggtggagaacgtcaccgcggacctcatc
accatcatggatgacgagggccagcgcgatacctacatgctgcgcaagttcgagcgcacc
aaccagaacaccaactacaaccagaccccgctggtgtccctgggcgagcgcgtcgaggcg
ggccaggtgcttgccgacggccccggtacccacaacggtgagatgtccctcggccgcaac
ctgctggttgccttcatgccgtgggaaggccacaactacgaggacgccatcatccttaac
cagcgcatcgtggaggaggacatcctcacctcgatccacatcgaggagcacgagatcgat
gctcgcgataccaagctgggcccggaggagatcacccgcgagatcccgaacgtctccgat
gacgttctgcgtgacctcgacgagcgcggcatcgtccgcatcggtgccgacgtccgcgcg
ggcgacatcctcgtcggtaaggtaaccccgaagggcgagaccgagctgaccccggaggag
cgcctgctgcgcgccatcttcggtgagaaggcccgcgaggtgcgcgatacctccatgaag
gtgccgcacggtgagaccggtaaggtcatcggcgtttcccgcttctcccgcgaggatgac
gacgatctggccccgggcgtcaacgaaatgatccgcgtctacgtggctcagaagcgcaag
atccaggacggcgataagctcgccggtcgccacggcaacaagggcgttgtgggcaagatt
ctcccgccggaggatatgccgttcatggaggatggcaccccggtggacatcatcctgaac
acccacggtgtgccgcgtcgtatgaacatcggccaggttctcgaggttcacctcggctgg
ctggcacacgcaggttggaagatcgacaccgaggacccggccaacgccgagctgctcaag
accctgccggaagagctttacgacgtcccgccagagtctctcaccgcaaccccagtcttt
gacggtgccaccaacgaggagatctctcgcctgttggcttcctccaagccgaaccgcgat
ggtgacgtcatggtggatgagcacggcaaggcccgcctcttcgacggccgctccggtgag
ccgtacatgtacccggtttccgtcggctacatgtacatgctcaagctgcaccacctcgtc
gacgagaagattcacgcccgctccaccggtccgtactccatgattacccagcagccgctg
ggtggtaaggcgcagttcggtggccagcgcttcggtgagatggaggtgtgggcaatgcag
gcatacggcgctgcctacaccctgcaggagctgttgaccatcaagtccgatgacgtggtc
ggccgcgtcaaggtctacgaggccattgtcaagggtgacaacatcccggatccgggcatc
ccggagtccttcaaggtcctcctcaaggagttgcagtccctctgcctgaacgtggaggtt
ctctccaccgacggcaccccgatggaactgtccggctccgacgatgatgacatggacggc
gctccgtccctgggcattaacctgtcccgcgacgagcgctccgacgcagacatcgcctag
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