Carnobacterium sp. CP1: NY10_2215
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Entry
NY10_2215 CDS
T04230
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
carc
Carnobacterium sp. CP1
Pathway
carc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NY10_2215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carc02000
]
NY10_2215
Transporters [BR:
carc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NY10_2215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
T2SSE
RsgA_GTPase
nSTAND3
AAA_14
AAA_16
SMC_N
ResIII
AAA_21
MMR_HSR1
Zeta_toxin
AAA_30
DUF87
AAA_23
TsaE
AAA
DO-GTPase2
DEAD
AAA_18
AAA_29
cobW
AAA_28
IstB_IS21
AAA_33
AAA_19
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
ALV22802
UniProt:
A0A0U3MV67
LinkDB
All DBs
Position
complement(2310439..2312259)
Genome browser
AA seq
606 aa
AA seq
DB search
MSKKEQVLLEDVDTEKPKDIKKSIRYFFELLMLQKKKTIPAVISNVIGTLAYVMIPLITA
RAIDGLIEAIKTPDTSMLESIREAITGPLLLLLLLSGIIFICNYFQEYLIASVSEEVSLT
LRKKITDKLNKLPLNFYDQTQVGDLLSRTTADADKVSTFIVMSFNQFVSSIIIVIVGLSL
MIYVSGRLALIIIIMILINIIVTKVISKKNQTLFGDNMYTLGKLSGATEEYYSGNTIIKA
FNKQEDVIQKADQLIDEQYTAHKKAQFVNFAIYPIMRTITQLAYISTALLGAVLAIQGTM
TIGLLQAFLQYVNQISDPITEASYVVNMLQGCLAAIERIYEVLDEENEVSDIANANVIDN
PLGQIEFSHVSFGYNKNQLIMKDVSFIAEPKKTIAIVGPTGAGKTTLVNLLMRFYEINSG
AVLFDGIDIKTLTRHDLRKQFGMVLQDTWLFEGTIAENISYGKKDATREEIIDAAKKAQC
DSFIKTLPEGYDTIISSENNMISQGQQQLLTIARTILSAPKVMILDEATSSIDTKTEIKI
QQAIDHLMMDRTSFVIAHRLSTIKNADLILVMDKGNIIETGSHNELLEQDGFYADLYQSQ
FQTPTA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaagaacaagtgcttttagaagacgtagacacagaaaaaccaaaagatata
aaaaaatcgattcgttattttttcgaactgctgatgctccaaaaaaagaaaaccatccct
gctgttatttcgaacgttatcggtacattagcgtacgtcatgattcctttaattacagcc
cgagctattgacggtctaatcgaagctatcaaaacgccggacacttcaatgttggaaagc
attagagaggctatcactggtcctctcctactgttgctgttgctttctggtatcattttt
atttgcaattactttcaggaatatttaatagcttctgtcagtgaagaggtcagtctaacc
ttacgtaagaaaataaccgataaactgaataaactgccattgaatttttacgatcaaaca
caagtgggcgatttgttgagtcgaacgacagcagatgcagataaagtatcaacctttatt
gtcatgagttttaatcaatttgttagttcaatcatcattgtcattgttgggttaagccta
atgatttatgttagcggtcgattagccttgatcattattatcatgattctaatcaacatt
attgtcacaaaagtcatttctaaaaagaatcaaactttatttggcgacaatatgtatacc
ttagggaaattgagtggtgctactgaagaatactattctggaaataccattatcaaagct
tttaataagcaagaagacgttattcaaaaagcagatcaattaattgacgaacaatatacc
gctcataaaaaggctcaatttgttaatttcgcgatctaccctatcatgagaaccattacc
caactagcttatattagcactgcattattgggtgctgttttagcgatccaaggaacaatg
acgataggactgcttcaagcttttctgcaatacgtcaaccaaatctcagatccgattaca
gaagcttcttatgtcgtaaatatgcttcaaggttgtttagcagctattgaacgtatttat
gaagttttagatgaagaaaacgaagtttctgatatcgcaaacgctaatgtgattgataat
cctcttggtcaaatcgaattttctcatgttagttttggctacaataaaaatcagctgatt
atgaaagacgtaagttttattgcagagcccaaaaagacgatcgctatcgtcggtccaaca
ggtgctggaaaaacaactctcgtaaatttgctgatgcgtttttatgaaattaatagtggt
gctgttttatttgatgggattgatattaaaacactcacaagacatgatctaagaaaacag
tttggtatggtgttgcaagatacttggctgtttgaaggaaccattgctgaaaatatcagc
tacggaaagaaagatgcaactagagaagaaattatagacgccgcaaaaaaagcccagtgt
gattcgtttatcaaaacattgccagaaggttatgacaccattatttcgagtgaaaataat
atgatctcgcaaggacaacaacaattgttaacgatcgctagaaccattttatctgcccct
aaagtaatgattttagatgaagcgacttcaagtatcgatactaaaacagaaattaaaatt
caacaagcgatcgatcatttgatgatggacagaacaagctttgtgattgctcatcgtctg
tcgactattaaaaatgcagatttaattttagtcatggacaaaggaaatattattgaaacg
ggcagccataacgaattgttagaacaagacggcttttatgctgacctttatcaaagccaa
ttccaaacaccaacagcttaa
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