Carnobacterium sp. CP1: NY10_359
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Entry
NY10_359 CDS
T04230
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
carc
Carnobacterium sp. CP1
Pathway
carc03030
DNA replication
carc03430
Mismatch repair
carc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NY10_359
03430 Mismatch repair
NY10_359
03440 Homologous recombination
NY10_359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carc03032
]
NY10_359
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_359
Enzymes [BR:
carc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NY10_359
DNA replication proteins [BR:
carc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NY10_359
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NY10_359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ALV20979
UniProt:
A0A0U3P017
LinkDB
All DBs
Position
317995..321333
Genome browser
AA seq
1112 aa
AA seq
DB search
MSFVHLQVISAYSLLKSTISIEKLVITAKERGYQAIALTDHNVLYGAIDFYKACKKHGIK
PIIGLALEINGVVDTQKNYSLILLAKNAAGYRSLMELSSQKMLLDRNEMLDGSILKEHSK
ELIAITPGITGEAEYFLMNQENTKAKDVIEQYRAIFPEQQFYVGVQLHDSLKTIQTELVA
LAQQTAVQTVALDDVRYLNSADDFSTKVLRAIDSGEKIDLEGQIMEGPYALPEKVQIVSD
FEAAGLQEAVNQTEKIAELIDVEIELQQHLLPKYPLPEQIQTAAYLRDRCTEGLGERVPN
YDAVYQQRLDHELAVIHTMGFEDYFLIVWDLMAYAHEEKIVTGAGRGSAAGSLVSFALGI
TDVDPIVYNLLFERFLNEERYTMPDIDLDFPDNRREEMLQYVKTKYGQDHVAQIATFGTL
AAKMALRDVARTFDLSQAEASVWSNAIPKVLGITLQAAYKQSASLRELVQKSEKNRLLFE
TAQKIEGLPRHVSTHAAGVVISDQRLNRYLPLQKGSGTIYLTQYAMGNVEEIGLLKMDFL
GLKNLAIIDQALKLIKREERLTLDLLDLPMDDPLTLEVFYKADTVGIFQFESAGIKNVLR
KLGPTSIEDVAAVNALYRPGPMEQIDLFIQRKKGQVPIVYPHDSLKEILEVTYGVMVYQE
QVMQVASKMGGYTLGQADILRRAIGKKQKDIIDLERTHFVNGAKGLGYTQEVATQVYDYI
ERFADYGFNRSHAVAYAFIAYQMAYLKAHYPAAFFVALLNSASNNPTKMKEFILEAKIRK
IILSPPDINKSFSVFSLKEGEIQFGLGSIKGLRREMILEVIRTRKETGAFHDLIDFLRRI
DAKWLKEEYIKPLIYTGAFDTLGYSRGVLIASLEGILSSIKLSGDNVGLFDILKPKYETA
EDLTLEEKLEAEEHYLGVYLSGHPTENYENLRFLKQASFVQNLQVGNQGNVIGLVKAVRK
IRTKKGEPMAFVTLNDASGDCSLTLFPPKYRQYSRLLEKGEILYVEGKVEANRDQTPQMI
VNRLENVEQLNQDQSPDRCFIRISSEKNNIQILSEMKETLKQHSGNIPVILYYEATNKKM
VLDETEWVDGSEMLQEVLKKIMGSKNVVIQKG
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgtacatttacaagttattagtgcctatagtttattaaaaagtacgatttcg
attgaaaaactcgttataaccgctaaggagcgtggctatcaagctatagcgttgacagac
cataatgtcttatatggcgccatcgatttttataaagcctgtaaaaaacatggaatcaaa
cccattatcggcttagcactagaaatcaacggtgtagtagatactcagaaaaattattcg
cttattttattagctaaaaatgcagcaggttacaggagtttgatggaactgtccagtcaa
aaaatgttattggacagaaatgagatgctggatggaagcatattaaaagagcacagtaaa
gaattgattgctattacgcctggaataaccggcgaagcagaatattttttaatgaaccaa
gaaaatacaaaagcgaaagacgttatcgaacagtaccgagcgatttttcctgagcagcaa
ttttatgtaggggttcaattgcacgattctttaaaaaccatccaaacagagttggtggca
ttggcgcaacagaccgctgttcaaactgtagctttggacgatgtgcggtatttgaattca
gctgatgacttcagtacgaaagtattaagagctattgactctggtgaaaagatcgattta
gagggtcaaataatggaaggcccttatgctttgcctgaaaaggttcaaatagtgagcgat
tttgaagccgctggtttacaagaagctgtcaaccaaacggaaaagattgctgaactcatt
gacgttgaaattgaattgcaacaacatttactgccaaagtatcctttaccggaacaaatt
cagacggctgcgtatttgcgtgaccgctgtacggaaggcttaggggaacgagttccaaat
tatgatgcggtatatcagcagcgccttgatcatgaattagctgttatccatacaatgggt
tttgaagattattttctgatcgtatgggacctcatggcatatgctcatgaagaaaaaata
gttaccggggcaggaagaggctcagcggcaggttcgttggtgtcttttgcattaggcatt
acagatgtcgatccgatcgtctacaatttattatttgaacgttttttgaatgaagaacgc
tatacgatgccggatatcgacttagactttccagacaatcgacgcgaagaaatgctgcag
tatgtaaaaacgaaatacgggcaagatcatgtggctcaaattgccacttttggaacattg
gcagcaaaaatggctttacgagatgttgcacgaacgtttgaccttagccaagctgaggcg
agcgtttggtccaatgccattccaaaagtcttaggaatcacacttcaagctgcttataag
caatccgcttccctgcgagaactagtgcaaaaaagcgaaaaaaatcgtttgttatttgaa
acagcacaaaaaatcgaaggtttgcctaggcacgtttcaacgcatgcagccggagtcgtc
atcagtgaccaacggttaaatcgttatttgcctttacaaaaaggcagcggtacgatttat
ttgacgcaatacgctatgggaaatgtagaagaaatcggcttgttaaagatggacttctta
ggcttgaaaaatctggcaatcattgatcaggctttaaagctgatcaaacgcgaggaaaga
ttaactcttgatttgctcgatctcccaatggacgatccgttgacattagaagtattttac
aaagccgatactgtcgggatattccagtttgaatcagccggtattaaaaatgtactgcgg
aaattaggaccgacttcaattgaagatgtggccgcggtaaatgcattgtatcgtcctggt
ccaatggaacaaattgatttatttattcaacggaaaaaaggccaagttcccattgtttat
cctcatgacagcttgaaagagattttggaagtcacgtatggcgtgatggtttatcaagaa
caagtcatgcaagtagcttctaaaatgggcggctatacattagggcaagccgatattttg
cgaagagccattgggaaaaaacaaaaagatattatcgacttggaacgaacccattttgtc
aatggtgctaagggtctggggtatacacaagaagttgcgactcaagtttacgactatatt
gaacggtttgccgattatggctttaatcgctcgcatgctgtcgcttatgctttcatcgct
taccagatggcttatttaaaagctcattatccagcagctttttttgttgcattgttaaac
tcagcctcaaacaaccccaccaaaatgaaagaatttattttggaagctaaaatacgaaaa
atcattttatcgccgcctgatattaacaaaagtttttcggtcttttcgttaaaagaggga
gaaattcaatttggtttagggtcgatcaaaggattgagaagagaaatgatcctggaggtt
atccgcaccagaaaagaaactggagcatttcatgatctgatcgacttccttcgacggata
gatgcaaaatggctgaaagaagaatacattaagccgttgatttatacgggggcttttgat
actttaggctattccagaggagtattgattgcttctttagaaggcattttatcgagcatt
aaattgagtggcgataacgttgggttattcgatattttaaaacctaaatatgaaacggct
gaagatttaacccttgaggagaaactagaagcagaagaacactatttaggagtatattta
tcaggacaccctactgaaaattatgaaaatttacgtttcttgaaacaagccagtttcgtt
caaaatctgcaagtcggcaatcaaggaaacgttataggcttagtcaaagctgttcggaaa
atcaggaccaaaaaaggcgaaccaatggcatttgtaacactaaatgatgcttcaggggat
tgttcactaacccttttcccgcctaaataccgtcaatatagccgcttacttgaaaagggt
gaaattctctatgtagaagggaaagtagaagctaatcgcgatcaaacgccgcaaatgatc
gtcaatcgtctagaaaatgttgaacaactcaaccaagaccaaagcccagacagatgtttt
attcggatatcttctgaaaaaaacaacattcagatattgtctgaaatgaaagaaacgtta
aagcagcattcaggaaacattcctgttattctatattacgaagcaaccaataaaaaaatg
gtgctggatgaaactgagtgggtcgacgggtcagaaatgttacaagaagttctcaaaaaa
attatgggttctaaaaatgtggttatccaaaaaggatga
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