Collimonas arenae: LT85_1437
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Entry
LT85_1437 CDS
T03512
Name
(GenBank) Choline dehydrogenase
Organism
care
Collimonas arenae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
DAO
NAD_binding_8
Lycopene_cycl
Pyr_redox_2
Pyr_redox_3
ApbA
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AIY40595
UniProt:
A0A0A1F9Y5
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Position
1594831..1596456
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AA seq
541 aa
AA seq
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MAFDFIIVGAGSAGCILANRLSESGKYSVLLLEAGGRDNSYWLKIPVGFARTYYNPEYNW
MYYSEPEAQMAGRRLYAPRGKVQGGSGNINAMIYVRGQACDFDDWEAAGNPGWGYKDVLP
YFKKLEAHPLGDTAYHNAKGLIGITQMKHDAHPICQDYLQACKELGYPLNDDFNGASFEG
AGIYEANIRKGRRDSSSYAYLHPALKRPNLTLECRAQAEQILFDPDKRAVGVAVLQNGLR
RVFTANKEVILAAGAVDSPKLLQLSGVADAELLARHEIPLVQHLPAVGKNLQDHLCVSFY
FKANKKTLNDELGSLFGQARAGIQYLFKRSGPLAMSVNQAGGFFKGSMQEQHPNLQLYFN
PLSYQIPKNPKAKLKPDPYSGFLLFFNPCRPSSRGAIEIADKDVGVPARIMPNYLSTQKD
IDEAIQGGALIRKLIEAPAFKKIIVEEVSPATAVSDDASMLQFFREQAGSIYHLCGSCAM
GPDQQKSVVSNQLKVHGVKALRVIDASIFPNITSGNINAAVMMVAEKGAEQILADHRQRA
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgatttcatcattgtcggcgctggttcagctggctgcattctggcgaatcgc
ctgagcgaatcgggcaagtacagtgtgttgctgctggaagcggggggcagggataattcc
tactggctgaagataccggtcggtttcgcccggacatactacaacccggaatacaactgg
atgtactacagcgaaccggaagcgcagatggcagggcgtcgcctgtatgcgccgcgtggc
aaggtgcagggtgggtcaggcaatatcaatgcgatgatttatgtgcgcggccaggcttgt
gattttgacgattgggaagctgccgggaatccggggtggggttataaagatgtgctgcct
tactttaagaaactggaagcgcatccgctcggcgataccgcctatcacaatgccaagggt
ttgatcggcatcacccagatgaagcacgatgcgcatcccatctgtcaggactacctccag
gcttgtaaggaactcggctatccgttgaatgatgatttcaacggcgccagcttcgagggt
gcgggtatctacgaagccaatatacgtaaaggcagacgcgattccagtagctacgcttac
ctgcatccggccttgaagcggcctaacctgacgctggaatgccgcgcccaggctgaacag
atcctgtttgatccggacaagcgcgcagtcggcgtcgcagtgttacaaaacggtctgcgc
agggtatttactgccaataaggaagtgatcctggcggcgggtgcggtcgattcgcctaaa
ctgctgcaactgtccggcgttgccgatgccgaattacttgctaggcatgagattcccttg
gtccagcatctgcccgcagtggggaagaatttacaggatcatctgtgcgtatcgttttat
ttcaaggcgaataaaaagaccttgaatgacgaattgggatcgctgttcggacaggcgcgg
gcggggatccaatacctgttcaagcgcagcggtccgctggcgatgagcgtcaaccaggcc
ggcggttttttcaaaggcagcatgcaggagcagcatccgaacctgcagctatacttcaat
cccttgtcctaccagattcccaagaatccgaaggcgaaactgaagccggacccgtattcc
ggcttcctgctgttcttcaatccatgccgtcccagcagccgcggcgccatcgagattgcg
gataaagatgtcggcgtgccagccaggatcatgccgaattacctgagcacgcaaaaggac
atagacgaggcgatacagggcggcgccttgatacgcaagctgatcgaggcgccggccttc
aagaaaatcatcgtggaagaggtatcgcccgcgactgcggtaagcgatgacgccagcatg
ctgcaatttttcagggagcaggccggatcgatctatcatctgtgcggctcatgcgcgatg
gggccggaccagcagaagtctgttgtatcgaaccagctgaaagtgcatggcgtcaaagcc
ctgcgcgtgatcgatgcgtcgatcttccccaacatcacgtccggcaatatcaatgccgcg
gtgatgatggtggcggaaaagggcgcagagcagatattggccgatcaccgccagcgcgca
gtgtaa
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