Collimonas arenae: LT85_3590
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Entry
LT85_3590 CDS
T03512
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
care
Collimonas arenae
Pathway
care03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
care00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LT85_3590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_3590
Enzymes [BR:
care01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LT85_3590
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LT85_3590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
AIY42748
UniProt:
A0A0A1FDF6
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Position
4059573..4060934
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AA seq
453 aa
AA seq
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MNISSTNDNYSSGPQVLTVSALNQAVARMLERSFPLAWVSGEISNFKSYASGHWYFTLKD
DAAQVRGVMFKGRAQHAGFTPRDGDKVEVRALVTLYAARGDYQLNVEAIRRAGVGNLYEA
FLRLKEKLNAEGLFDPARKRPLPPFARTIGIVTSLQAAALRDILTALARRAPHVRVILYP
TPVQGDGAAEKIARAINTAAARAECELLLVCRGGGSIEDLWSFNDEAVARAIVAAPMPVI
SGVGHETDFTIADFAADLRAATPTAAAELATVPRGDWLATLEGHADDLTRALRRQLAEAG
QTLDWLGRRLSSPAATIAHERVKLQSLQNRLQHATHIPLTQSRYALLNLRTRLNAQIPST
KTSRQILLEQSRRLGSALTAKSHNSRQALAALNAQLELLNPQRTLERGYAIVSDAKGHVI
RAPKELQPRHFVTVQLAEGSAKVGIDSVQATLD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctccagcaccaacgacaactattccagcggcccgcaagtactcacagtatcg
gccctgaatcaagccgttgcccgcatgctggaacgcagttttccactggcctgggtatcg
ggtgaaatatcgaacttcaaaagctatgcatccggtcactggtacttcacgctcaaagac
gatgcggcgcaagtgcgcggcgtgatgttcaagggccgcgcccagcatgccggctttacg
ccgcgcgatggcgacaaagtcgaagtgcgggcactggtgacgttgtatgcggcgcgcggc
gactatcagctcaatgtcgaggcgatccggcgtgccggcgtcggcaacctgtacgaagct
tttttgcgcctgaaggaaaaactgaacgccgagggcttgttcgatccggcgcgcaaacgt
ccactgccgccatttgcaagaaccatcggcattgtcacaagcctgcaagcagcggcgctg
cgcgatatcctgaccgcgctggcgcggcgtgcgccgcatgtgcgcgtgatcctttaccct
actccggtgcaaggcgacggcgccgctgaaaagatcgcacgcgctatcaataccgctgct
gcgcgtgccgagtgcgagttgctgctggtctgccgtggcggcgggagcatcgaggattta
tggtccttcaatgacgaagcggtggcgcgagcaattgtggctgcgccgatgcctgtgatt
tccggcgtcggccacgaaaccgatttcacgatcgcagacttcgccgccgatctacgcgcc
gccactccgaccgccgccgccgagctggcgaccgtaccacgcggcgactggctggcgacg
ctggaaggccatgccgatgacctgacccgcgccctgcgccggcagctggctgaagccggc
cagactctggactggctaggccgccgcctgagcagtccggccgccaccatcgctcatgaa
agagtcaagttgcagagtctgcaaaacaggctgcagcatgcaacccacatccccctgaca
caatcgcgctatgccttattgaatttgcgcacccgcttgaatgcgcaaatccccagcacc
aaaacatcgcgtcagatattactggagcaaagccggcgtctcggtagcgcgttgacggca
aaaagccataacagccgccaagcgctggcagccctgaatgcgcagcttgaactgttgaat
ccgcaacgtacactggaacgcggctacgccatcgtctccgatgccaagggccatgtgatt
cgtgcaccgaaagaactccagccacggcatttcgtcaccgtgcagctggcggaaggcagc
gccaaggtcggcatagatagtgttcaggcaacgctggattga
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