Clostridium argentinense: RSJ17_12585
Help
Entry
RSJ17_12585 CDS
T05123
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
carg
Clostridium argentinense
Pathway
carg00550
Peptidoglycan biosynthesis
carg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RSJ17_12585
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
carg01011
]
RSJ17_12585
Peptidoglycan biosynthesis and degradation proteins [BR:
carg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RSJ17_12585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
ARC85275
LinkDB
All DBs
Position
complement(2627257..2629449)
Genome browser
AA seq
730 aa
AA seq
DB search
MTKAKTKNKTVNKKRIKYALLFTLLIFIYICYRLFTVMFIKGDEYKSKGVQQWTNDSRIN
AKRGRILDRDENELAVSANVYRVDLDLKALRESLEKKKLTMKQIAPDLAQILTMDSDTVL
EILTEPLPNGKPKNAAILKRRIEKEVADKIKAYSKEKDIIGLVISTDTKRYYPNDNLASH
AIGHTNSDGEGLTGIELYYNKYLAGIPGIKVSEADRRSEDLPYNVSDYSKPVDGRDVVLT
IDQNIQFFADKAAEKALADNNAKAVSIMVMNPNNGEILATANKPDYNLNNPWPEDLSDSE
TEALWRNGSVSDAFEPGSIFKVVTATAAIETGNVKEGENFYCSGFSVVDGKPIHCWKTEG
HGDQSFRDIIANSCNVGFMTLAQRMGKETLNKYIEKYGFGKKTGVDLPGETEGIVKSVES
MSNSDLATISFGQSDTVSIVQYMMAFNAVANGGKLITPHLMKEIVHYDEDNKRVVDQEFN
PKVTEGNFRPETLEEMRGHLEAAVEKNGTAYIPGYHIAGKTGTAEKPDFENGGYAKDKYI
GSFVGMAPANDPKITIVVTVDEPDPSKYYGNEVAAPVGKSLFQDIFNYLALNPEGSSDKS
KDNLLKNIAIPEIRGTKKDDGVKILKDNNLNMKIEGDGEYIVDVSPKPGYMVKEGTEIIV
YTGKKADTDTTVAVPDLNGYSKEKASELLESLGLHIEFDGEGSVSKQSIAPSQHVKKGTV
VNVTLKVSGG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaagcaaaaacaaaaaataaaacagtgaataagaaaagaataaaatatgcatta
ttatttacacttttaatatttatctacatttgttatagattatttacagtaatgtttatt
aaaggcgatgaatataaaagtaagggtgtgcaacaatggacaaatgactctagaataaat
gcaaagcgtggaaggattttagatagagatgaaaatgaattagctgtaagtgctaatgta
tatagagttgacttagatttgaaggcattgagagaatctttagaaaagaaaaaattaact
atgaaacaaatagctccagatttagcacaaatattgaccatggatagtgatactgtactt
gaaattttgactgaaccattaccaaatggtaagcctaaaaatgcagctattttaaaaagg
agaattgaaaaagaagtagctgataaaattaaagcatattcaaaagagaaagatataata
ggcttggttatttcgacagataccaagagatattatcccaatgataatcttgcatcccat
gctattgggcatacaaattccgatggtgagggattaacgggaatagaattatactacaat
aagtatttagctggtataccaggaataaaagtttctgaagcggacagaagaagtgaagat
ttgccttataatgtctctgattatagcaaaccagtagatggaagagacgtggttttaact
attgaccaaaatattcaattttttgctgataaagctgcagagaaagcattagctgataat
aatgctaaagctgtttctataatggttatgaatcctaataatggagagatattagctaca
gcaaataaaccagattacaatttgaataatccttggccagaagatcttagtgatagtgaa
actgaagcattatggagaaatgggtctgtaagtgatgcatttgaaccaggatcaattttt
aaagtagtaacagctacagctgcaatagaaactggaaacgtaaaagaaggagaaaatttt
tattgtagtggtttttctgtagtagatggcaaacctatccactgttggaaaacagaagga
catggagatcaaagttttagagatattatagcaaattcttgtaatgttggttttatgacc
ttagcacaaagaatgggaaaagaaactttaaataaatacattgagaaatatggctttggt
aaaaaaactggagtggatttaccgggagaaactgaaggaatagttaaatcagtggaatcg
atgagtaattctgacttagcaactatttcttttggacaaagtgatacagtatcaatagtt
caatatatgatggcatttaatgctgttgcaaatggtggaaaattaattactcctcattta
atgaaagaaattgtccattatgatgaggataataagagagtggtagatcaagaatttaat
cctaaggttacagaaggcaattttagaccggagactttggaagagatgaggggacattta
gaggcagctgtagaaaaaaatggaactgcatatatacctggttatcatatagcaggaaag
acaggtactgcagaaaagcctgattttgaaaatggtggatatgcaaaggataagtatatt
ggttcatttgtaggtatggctccggccaatgatcctaagattactatagttgtaacagta
gatgagcctgatccatctaaatattacggcaatgaagtagcagcaccagtaggtaaaagt
ttatttcaagatatatttaattatttagctttaaacccagaaggcagttcagataaaagc
aaagataatttattaaagaacatagctatacctgaaataagaggaacaaaaaaggatgat
ggagttaaaattttaaaggataataatttaaatatgaaaatagaaggtgatggggagtac
atagttgatgtcagccctaaacctggatatatggttaaagaaggaacagaaattatagtg
tataccggtaaaaaagcggatacagatactacagtagcagtgccggacttaaatggatac
agcaaagaaaaagcaagtgaacttctagaaagtttaggacttcacatagaatttgatggt
gaagggtcagtatcaaaacaaagcattgctccaagtcaacatgtaaaaaagggaacggta
gtaaatgtgactttaaaggtatcaggaggttaa
DBGET
integrated database retrieval system
