Chitinimonas arctica: FNU76_12820
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Entry
FNU76_12820 CDS
T06695
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cari
Chitinimonas arctica
Brite
KEGG Orthology (KO) [BR:
cari00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cari03032
]
FNU76_12820 (topA)
03400 DNA repair and recombination proteins [BR:
cari03400
]
FNU76_12820 (topA)
Enzymes [BR:
cari01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FNU76_12820 (topA)
DNA replication proteins [BR:
cari03032
]
Prokaryotic type
DNA Topoisomerases
FNU76_12820 (topA)
DNA repair and recombination proteins [BR:
cari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FNU76_12820 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDQ27173
UniProt:
A0A516SG85
LinkDB
All DBs
Position
complement(2835280..2837592)
Genome browser
AA seq
770 aa
AA seq
DB search
MADNLLIVESPSKAKTLKKYLGSDFEILASYGHVRGLIRKDGSVEVDNGFAMKYQVIAKN
AKHVDAIVSAAKAAKNVFLATDPDREGEAISWHLLEILHGKKALTNKLVKRVVFHEITES
AVLAAVANPRDVDNHLVNAQQARSALDYLVGFNLSPLLWRKVRSGLSAGRVQSPALRLIC
ERELEIRAFVSQEYWSVHLDSHKGKTKFGAKLNEWRGKRLEQFDVPDEATQAEILAALEG
KPATVANVEKKRKTRNPTAPFTTSTMQQEAVRKLGMTTDRTMRTAQQLYEGIALSDGTAG
LITYMRTDSVALAAEAVAEIRDYIGANFDAESLPANPVTYKNKSKNAQEAHEAIRPTSIL
RTPASVKSYLSAEQFKLYEMIWKRTLASQMAPARFDTTGIDITVGEAVFRASGQVLVFAG
FLAVYEEDVDDAEDEDSAKLPVLEAGESVPVDKLFGEQHFTQPPPRFSEASLVKALEEFG
IGRPSTYASIIKTLKDREYVNLDKKRFLPTDTGEVVNKFLTDHFAQYVDYQFTSKLEDKL
DEISNGERDWIPVMEEFWTGFSAQVEEKKSLKRSEVTHEALDEACPKCSKQLTVRLGKRG
RFVGCTGYPECDYTRDMNETAEQKAEEVVQVIDDRVCPNDGGQLIVKTGRYGKFIGCANY
PKCKHIEPLEKPKDTGVSCPSCNAGMLIERKSRYGKLFYSCNTYPKCTYATWNPPIAESC
PKCKWPVMTLKTTKRRGLEKVCPQKECGHAEVVMTPDQLAAQAEAAEAAE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatctgttgatcgtagaatcgccctccaaggcgaaaacactgaaaaaatac
ctgggcagcgatttcgaaatcctggcctcctacggtcatgtgcggggtctgattcgcaag
gatggctcggtcgaggtcgacaatggctttgccatgaagtaccaagtgatcgccaagaac
gccaagcatgtggacgccatcgtcagcgcggccaaggcggccaagaacgtcttcctggca
accgacccggaccgcgaaggcgaagcgatctcctggcacttgctggaaatcctccacggc
aagaaggccttgaccaacaagctggtcaagcgggtggtattccacgaaatcaccgagtcg
gcggtgctggccgccgtggccaatccgcgcgatgtggacaaccacctggtcaatgcccag
caggcgcgcagcgcgcttgactatctggtcggcttcaatctttcgccgctgttgtggcgc
aaggtccggtccggcctgtccgcgggccgggtacagagcccggccttacgcttgatctgc
gagcgcgagcttgagatccgggcctttgtcagccaggaatactggtccgtccatctggac
agccataagggcaagaccaagttcggcgccaagctcaatgagtggcgcggcaagaggctg
gaacaattcgatgtgcccgacgaggccacccaagccgagatcctggctgccctggaaggc
aagccggcgaccgtggccaatgtcgaaaagaagcgcaagacacgcaacccgacagccccc
ttcaccacgtcgaccatgcagcaggaagccgtgcgcaagctgggcatgaccaccgaccgc
accatgcgtaccgcgcagcagctgtacgaaggtatcgccctgagcgacggcaccgccggc
ttgatcacctatatgcgtaccgactcggtagcgctggccgcggaggccgtagccgagatc
cgcgactatatcggcgcgaatttcgatgccgaatcgctgccggccaacccggtgacttac
aagaacaaatccaagaacgcccaggaagcgcacgaggcgatccgccccacttccatcctg
cgcacgcccgcctcggtcaagtcctacctgagcgccgagcagttcaagctgtacgaaatg
atctggaagcgcaccctggcctcgcagatggcgccggcccgcttcgataccaccggcatc
gatatcacggtcggcgaagcggtgttccgcgccagcggccaagtgctggtcttcgcgggc
ttcctggccgtctacgaagaagacgtggacgacgccgaggatgaagacagcgccaagctg
cccgtgctggaagcgggcgaatcggtaccggtggacaagctgttcggcgagcagcatttc
acccagccgccgccgcgcttctcggaagcctcgctggtcaaggccctggaagaattcggg
atcggccgcccttccacctacgcctccatcatcaagacgctgaaggaccgcgagtacgtc
aatctcgataaaaaacgcttcctgccgaccgataccggcgaggtggtcaacaagttcctg
accgaccattttgcccaatacgtcgattaccagttcacctccaagctggaagacaagctg
gacgagatctcgaacggcgagcgtgactggatcccggtgatggaagagttctggaccggt
ttttcggcccaggtggaagaaaagaagtcgctcaagcgcagcgaagtcacccacgaggcg
ctggacgaagcctgtcccaagtgcagcaagcaactcaccgtgcggctgggcaagcgcggc
cgctttgtcggctgcaccggctatcccgagtgcgattacacccgcgatatgaatgaaacc
gccgagcaaaaggcggaagaagtggtgcaggtcatcgatgaccgcgtctgtccgaacgac
ggtggccaattgatcgtcaagaccggccgctacggtaagttcatcggctgcgccaactac
ccgaagtgcaagcatatcgagccgctggagaagccgaaggacacgggcgtcagctgcccc
agctgcaatgccggcatgctgatcgaacgcaagtcgcgctacggcaaactgttctacagt
tgcaatacttatccgaaatgcacctacgccacctggaacccgcccatcgcggaaagctgc
cccaagtgcaaatggccggtcatgacactcaagaccaccaagcgtcgcggactggaaaaa
gtttgtccgcagaaggaatgcggccatgccgaggtggtgatgacgccggaccaactggcc
gcgcaagccgaggcggcggaagcggccgagtaa
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