Caulobacter sp. FWC26: CSW63_22350
Help
Entry
CSW63_22350 CDS
T05901
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cauf
Caulobacter sp. FWC26
Pathway
cauf02020
Two-component system
cauf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cauf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSW63_22350 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSW63_22350 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cauf03021
]
CSW63_22350 (rpoN)
Transcription machinery [BR:
cauf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSW63_22350 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AZS23130
UniProt:
A0A3Q9IJW5
LinkDB
All DBs
Position
complement(4355749..4357242)
Genome browser
AA seq
497 aa
AA seq
DB search
MALSHRLELRQGQGLVITPQLQQAIKLLQLSNIELDAFVEAELERNPLLQRDEGDHEPTG
EVEAPQDASLTQVDAVADTTAGREMDAPSEDVSPGERATGDGAEAEHAGGQIDWSRAGGG
GSFESDDGYERALTDTPTLAAHLRAQLVQAALSPARNAVAEILIDAVDEGGYLRLDITEL
AQRLGCELALVEEILAVLQGFEPVGVFARDVRECLALQLKDLNRYDPAMAAMLDHLELLA
KRDLASLRRICGVDDEDLRDMIAEIRSLNPRPGAAYHSEPAETLVPDVMVREGLGGMWHV
ELNTDTLPRVLVDQRYHARVSKGARSDQEKTFVADCMASANWLVKSLDQRAKTILKVASE
IVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSA
IQSSEGGEAHSAASVRHKIKGLVDAEKCEADVHSDDRIVEILKAAGVDIARRTVAKYREA
MRIPSSVERRRLMKEAV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctcagccaccgactagagctccggcagggccagggcctcgtcatcaccccgcaa
ctgcagcaggccatcaagctgctgcagctgtcgaacatcgaactcgacgccttcgtcgag
gcggagctggagcgcaatccgctcctgcaacgcgatgagggcgatcacgagccgacgggc
gaggtcgaagccccgcaggacgccagcctgacccaggtcgacgcggtcgccgacaccacg
gccggccgcgagatggacgccccgtccgaggacgtctcgcccggcgaacgcgctacgggc
gacggcgcggaagccgagcacgcgggcggccagatcgactggtcgcgcgctggcggcggc
ggttcgttcgagagcgacgacggttatgaacgcgccctcaccgacacaccgaccctcgct
gcgcacctgcgcgcccagctggtccaggccgcgctgtcgccggcgcgcaacgcggtggcc
gagatcctgatcgacgcggtcgacgagggcggctacctgcgcctggacatcaccgagctg
gctcagcgcctgggttgcgaactggcgcttgtcgaggagatcctggcggttctgcagggc
tttgagccggtcggcgtcttcgcccgcgacgtgcgcgagtgtctggcgctgcagctgaag
gatctcaaccgctacgacccggccatggccgcgatgctcgatcaccttgagctgctggcc
aaacgggatctggcgagtctgcgccggatctgtggtgtcgacgatgaagatctgcgcgac
atgatcgccgagatccggtcgctcaatccccgtccgggcgcggcctaccacagcgagccg
gccgagaccctggtgcccgacgtcatggtccgcgaggggctgggcggcatgtggcacgtg
gagctcaacaccgacaccctgccgcgcgtgctggtcgaccagcgctaccacgcccgcgtc
tcgaagggggcgcgcagcgatcaggagaagaccttcgtcgccgactgcatggcttcggcc
aactggctggtgaaaagcctggaccagcgcgccaagaccatcctgaaggtcgccagcgag
atcgtgcgccagcaggacggtttcttagcgttcggcgtcgagcacctgcgtcccctgaac
ctgaagacggtcgccgacgcgatcggcatgcacgagagcacggtcagccgcgtcacctcc
aacaagtacatcgccaccccgcgcggcgtcttcgagctgaagttcttcttcacctccgcc
atccagtcctcggaaggcggcgaggcccactcggccgccagcgtccgtcacaagatcaag
ggcctggtggacgccgagaagtgcgaggccgacgtccactccgacgatcgcatcgttgag
attctcaaggcggccggggtcgacatcgcccgtcggaccgtggccaagtaccgcgaggcc
atgcggatcccctcttcggtggagcggcggcgcctgatgaaagaggcggtctga
DBGET
integrated database retrieval system
