Carnobacterium inhibens: Q783_08620
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Entry
Q783_08620 CDS
T02884
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
caw
Carnobacterium inhibens
Pathway
caw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
caw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q783_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caw03400
]
Q783_08620
DNA repair and recombination proteins [BR:
caw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q783_08620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
GIY_YIG_2
HHH_2
HHH
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AGY82246
UniProt:
U5SB29
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Position
complement(1768384..1770156)
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AA seq
590 aa
AA seq
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MVSTHINNKLMLLPDLPGCYLMKNKEKEIIYIGKAKNLKNRVRSYFRGTHEGKTQLLVEE
IVDFETIITSTDKECLLLEITLIKKHQPKYNIKLKQGTSYPYLKITNEKDPQLIITSEVK
RDGGHYFGPYPNVYAASETQQFIQKVYPLRKCNGHQKRACLYYHLGQCIGPCDHEVPQEE
YDAQIDKIRRFLNGDVKEIKKILKSKMMQAADELAFERAAEYRNQIQYIETTVERQNIIT
NDFTTRDVFSFYMNKGWISIQVFFIRQATLIKREATIFPCYDTPQEELASYIVQFYQEAN
HLLPKEILVPSGLDTKILSEVLEIPVKVPIQGRKKDMLDLATKNSEISLNEKFQLIEMDD
RKTVGAMKELSEALNLPLIKRIEAFDHSNIQGTNPVSAMVSFLDGKPDKSNYRKYKIKSV
TGSNELATTEEVIRRRYERLLKEGKPLPDLILMDGGKIQVNGAINILENELGLSIPVAGM
VKDEKHRTSSLIFGEDLQRVPLKPTSQAFYLVQRIQDEVHRFAITFHRQLRGKNSLSSKL
DRIEGVGPKTRTKILKHFKSVKKVKDASVEEIKGLGIPLKTAVKIKEGLE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtactcatattaataataaattgatgttgcttcctgatttgccaggatgctat
ttgatgaaaaataaagaaaaagaaatcatttatattggaaaagctaaaaatttaaaaaat
cgggttcgttcttactttagaggaacacatgaagggaaaactcaattgttggttgaagaa
atagtggactttgaaaccattattacgtcaacagataaagagtgtttgctccttgagatt
acactgatcaaaaaacaccaaccaaaatacaatattaaattaaaacaaggaaccagttac
ccttatttgaagatcacaaatgaaaaagaccctcaattaattattacttctgaagtaaaa
agagatggcgggcattactttggcccgtatcctaatgtctatgcagcaagtgaaacacag
cagtttatccaaaaagtatatcctttaagaaaatgtaacgggcaccagaaaagggcttgt
ttatactatcatctcggacaatgtatcggaccttgcgatcatgaagttcctcaagaagag
tacgatgctcaaatagataaaattagacgttttttaaacggtgatgtaaaagaaataaaa
aaaatattgaaaagcaaaatgatgcaagcagctgatgagctggcttttgaacgagcagca
gaataccgtaatcaaattcaatacattgaaacaacagtagaaaggcaaaatattattacc
aatgatttcactacaagagatgtgtttagtttttatatgaataaaggatggatctctatt
caagtattctttattcgacaagctacgttaattaaacgtgaagcaactatcttcccgtgt
tatgatacaccccaagaagaattggcctcttacattgtgcaattttatcaagaggcaaac
catttgttgccaaaagaaatcttagttccgagtggtttagatactaaaattttatctgag
gtgctagaaataccagtcaaggtaccgattcaagggcgtaaaaaagacatgttggatctt
gcaacaaaaaatagtgaaatttcattgaacgaaaaattccaactgatcgagatggatgat
cgaaaaacggtaggggctatgaaagaactatcagaagcattgaatctgccgctaatcaag
cgcattgaagcatttgaccattccaatattcaaggaaccaatcctgtttcagctatggtt
tcttttttagacggaaaaccagataaaagcaattaccgaaaatataaaatcaaaagtgta
acgggcagcaatgaacttgctactactgaagaagtcataagaagacgatacgagcgactg
ttgaaagaaggcaaaccactgcctgatttgattttaatggatgggggtaaaattcaagta
aatggtgcaatcaacattcttgaaaatgagcttggtttatctattcctgtagcaggtatg
gtgaaagatgaaaaacatagaacgtcttctcttatttttggagaagatcttcagagagtt
cctcttaagccaaccagccaagctttttatcttgtgcaacgcattcaagacgaagttcac
cgttttgctattacattccatagacaattacgtggtaaaaatagtttatcttctaaattg
gatcgtattgaaggcgtgggaccaaagacacgaacaaaaatattaaaacattttaaatca
gtcaaaaaagtaaaagatgcaagtgtggaagaaatcaaaggactaggcattcctctaaaa
acggctgtgaaaatcaaagaaggactcgagtaa
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