Serpentinimonas raichei: SRAA_2000
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Entry
SRAA_2000 CDS
T03614
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase and related ATP-grasp enzymes
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cbaa
Serpentinimonas raichei
Pathway
cbaa00470
D-Amino acid metabolism
cbaa00550
Peptidoglycan biosynthesis
cbaa01100
Metabolic pathways
cbaa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cbaa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SRAA_2000 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SRAA_2000 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SRAA_2000 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbaa01011
]
SRAA_2000 (ddl)
Enzymes [BR:
cbaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SRAA_2000 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbaa01011
]
Precursor biosynthesis
Amino acid ligase
SRAA_2000 (ddl)
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATPgrasp_ST
GARS_A
ATP-grasp
TTL
ATP-grasp_4
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BAO81854
UniProt:
A0A060NSK9
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Position
complement(2148791..2149819)
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AA seq
342 aa
AA seq
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MSQNASQNASPNASQIDPRALGKVAVLLGGFSAEREVSLMSGQGVLAALQRSGVDAHAFD
PAERELWQLKAQGFERAFITLHGRFGEDGTVQGALELMGIAYTGPGVLSSSLSMDKIMSK
RIWRAEGLPTPDWRQVRSGAETEAALAALGAPMIVKPAREGSTIGLSKISHASECAAAYA
LAAQCDPEVLCEQCIVGDEVTVALLGQGEAAQALPLIRIQVPGGNYDYEHKYFSDETQYL
IPSGLPAAEEAAIQRLALQAYQSLDCRGWSRVDVMIDAATRRPYLLELNSSPGMTGHSLV
PMAARAVGLSYEALCLQVLASAGLDNPLPAALTGTGTAGQPQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacgcaagccaaaacgctagcccgaacgccagccagatcgatccgcgcgca
ctgggcaaggtggcggtgttgctgggcggcttttcggccgagcgcgaagtctcgctcatg
tccgggcagggcgtgctggcggccttgcagcgcagcggcgtcgatgcgcacgccttcgac
ccggccgagcgcgagctctggcagctcaaggcccagggcttcgagcgtgccttcatcacc
ctgcacggccgctttggcgaagacggcacggtgcagggcgcgctggagctgatgggcatc
gcctacaccgggcccggcgtgctgtcctccagcctgagcatggacaaaatcatgagcaag
cgcatttggcgcgccgaggggctgcccacgcccgactggcgccaggtgcgcagcggcgcc
gaaaccgaggccgcgctggccgccttgggcgcgcccatgatcgtcaaaccggcgcgcgag
ggctcgaccatcggcctgagcaagatcagccacgccagcgagtgcgccgccgcctacgcg
ctggcggcccagtgcgaccccgaggtgctgtgcgagcaatgcatcgtgggcgacgaggtc
acggtggcgctgctcggccaaggcgaggcggcgcaggcgctgcccctgatccgcatccag
gtgcccggcggcaactacgactacgagcacaaatacttcagcgacgaaacccagtacctc
atccccagtggcctgccggcggccgaggaggccgccatccagcgcctggcgctgcaggcc
taccagagcctggactgccgcggctggtcgcgggtggatgtgatgatagacgccgccacg
cgccgcccttatctgctggagctcaactcctcgcccggcatgaccgggcactcgctggtg
ccgatggcggcgcgcgccgtgggcctgagctacgaggccttgtgcctgcaggtgctggcc
agcgcgggcctggacaaccccttgcccgccgcgctgaccggcaccggcaccgcggggcaa
ccccagtaa
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