KEGG   Cellulophaga baltica NN016038: M667_06745Help
Entry
M667_06745        CDS       T03562                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cbal  Cellulophaga baltica NN016038
Pathway
cbal03030  DNA replication
cbal03410  Base excision repair
cbal03420  Nucleotide excision repair
cbal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M667_06745
   03410 Base excision repair
    M667_06745
   03420 Nucleotide excision repair
    M667_06745
   03430 Mismatch repair
    M667_06745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbal03032]
    M667_06745
   03400 DNA repair and recombination proteins [BR:cbal03400]
    M667_06745
Enzymes [BR:cbal01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     M667_06745
    6.5.1.6  DNA ligase (ATP or NAD+)
     M667_06745
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     M667_06745
DNA replication proteins [BR:cbal03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    M667_06745
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     M667_06745
DNA repair and recombination proteins [BR:cbal03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M667_06745
   NER (nucleotide excision repair)
    Other NER factors
     M667_06745
   MMR (mismatch exicision repair)
    Other MMR factors
     M667_06745
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AIY12932
LinkDB All DBs
Position
complement(1577775..1579403)
Genome map
AA seq 542 aa AA seqDB search
MKNFASLIKTLDSTTKTNTKVTALAEYFAKASDTDKVWTIAILSHRRPPRPVNTTLLRQW
ASELSNIPSWLFEESYHIVGDLAETIALVIPSNPLQTDKSLTEFLEEMIHLKKKPEEEKK
EYLYNNWKALDYYERFVFTKLITGGFRIGVSQKLMTKALSKATEINEDILAYKLMGNWDP
KTITFQELILEENENDYLSKPYPFYLAYAIENEVHDLGDVQEWSAEHKWDGIRSQTIFRN
DELFVWSRGEELVTDKYPELEKLVGIIPNGTVIDAEILPYANNIIGTFNDLQTRIGRKTV
SKALLKKTPVILKAYDILEWEGNDIRHLPFIERRELLEKLFQTISVIENLPFQISETIHC
STWEEVAKERERAREMHSEGLMLKRKDSPYLVGRKKGDWWKWKVDPLTIDAVLTYAMRGH
GRRSNLFTDYTFALWNTNEKGEKELVTFAKAYSGLTDSEFRKVDAWIKKNTLERFGTVRS
VTPHHVFEIAFEGIALSKRHKSGIATRFPRIIRWRHDKKIEDANTIEDLKSLIPSTSITT
TE
NT seq 1629 nt NT seq  +upstreamnt  +downstreamnt
atgaagaattttgcatcacttattaaaaccttagacagcacaaccaaaacaaatacaaag
gttactgctctagctgagtattttgcaaaagcgagtgatacagataaggtgtggaccatc
gctatcttatcacatcgaagacctccaagaccggtaaataccaccttgttgagacaatgg
gcttcagaattatccaatatcccttcatggctttttgaagagagttatcatattgtgggt
gatttagcagaaactatagccctagtaattccatccaatcctttacaaacggacaaatcg
ctcacggaatttttagaagaaatgattcatttaaaaaagaaacccgaagaagagaaaaaa
gaatacctctacaacaactggaaagcattagattattatgaacgttttgtttttaccaaa
ttaattactggaggtttccgaataggtgtaagtcaaaaattaatgacaaaggccttatct
aaggctacagaaataaatgaggatatattagcctataaattgatggggaattgggatcct
aaaacaattacttttcaagaactgatattagaggaaaatgaaaatgactacctatcaaaa
ccatatcctttttatttagcttatgctattgaaaatgaagtacatgatctgggtgatgtg
caagaatggtctgcagaacataaatgggatggtatacgctcacaaaccatatttaggaat
gacgaattatttgtatggagtcgcggagaagaattagtaaccgataagtatcctgaatta
gaaaaacttgttggtattattccaaacgggaccgtcattgatgcggaaattttaccctac
gccaataacattatcggtactttcaatgatttacaaactaggattggaagaaaaacggtt
tctaaagcactgctaaaaaaaacacccgtaatccttaaagcctatgatattttagaatgg
gaaggaaatgatattcggcatcttccttttatagaacgaagggagctattagaaaaatta
tttcaaactatttcagttatagagaatttgcctttccaaatttcagaaacaatacattgc
tccacttgggaagaggttgcgaaagaaagggaacgggcacgagaaatgcatagtgaaggt
ttaatgctcaaaagaaaagattctccctacttggtaggtagaaaaaagggcgattggtgg
aaatggaaagtagacccgctaacgattgatgctgtattaacctatgctatgcgcggacac
ggaagaagaagtaatttatttaccgattatacttttgcgctctggaataccaatgagaag
ggagaaaaagagctggtcacttttgcaaaagcctattccggacttacggattcagagttc
cgtaaagtagatgcttggattaaaaagaatacacttgaacgttttggcaccgtaagaagt
gttaccccacatcatgtatttgaaattgcttttgaaggaatcgctttatcaaaaaggcat
aaaagcggcattgctacgcgattccctagaattatacgctggcgacatgataaaaaaata
gaagatgccaatactattgaagatttaaaaagcttaatcccaagtacaagtattacgact
accgaataa

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