Clostridium botulinum B1 Okra: CLD_0974
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Entry
CLD_0974 CDS
T00671
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb00470
D-Amino acid metabolism
cbb00550
Peptidoglycan biosynthesis
cbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CLD_0974 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLD_0974 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
CLD_0974 (murD)
Enzymes [BR:
cbb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CLD_0974 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbb01011
]
Precursor biosynthesis
Amino acid ligase
CLD_0974 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
DUF6506
QRPTase_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACA44295
UniProt:
B1IGJ0
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All DBs
Position
complement(3827817..3829193)
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AA seq
458 aa
AA seq
DB search
MKSNFSKFKDFIKYKKVAVVGIGVSNRPLIKFLVKLGAKVTAFDKKHREKLGSISFELEE
IGVDLVLGENYLDKLDGYDVIFKTPSMRIDRPEFVKAKESGAYITSEMEEFIKYCPAKVF
GITGSDGKTTTTTLVYEMLKREGYRTWVGGNIGTPLFANIEEMKEDHMVVLELSSFQLMT
MDVSPEISLITNLSPNHLDVHKDFEEYVWAKKNIFKYQSSNNLLVLNKDDDLTNGMENEA
LGDVLKFSLVEKVYNGACLSNNKLTIQGKEVCDSKDINLKGRHNIANLLAAFCMVNKYVS
IDSMKYVATNFSGVEHRCEFIREVNGVKYYNDSIASSPSRTLAGLNSFEKPVILIAGGYD
KKIPFEPLAEGGYDKIKILILMGDTKNKIRSAFEKVISYKKCEMEIVIVNSMEEAVKVAD
DMAEKGDIITLSPACASFDMYPNFEIRGNEFKNIVNSL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatttttctaagtttaaggattttataaagtataaaaaagtagcagtggta
ggtataggggtaagcaatagacctttaataaaatttttagttaagttaggtgcaaaagta
actgcttttgacaaaaaacatagagaaaaattaggaagtataagttttgaattagaagag
ataggtgtagatttagtattaggtgaaaattatttagataaattagatggatatgatgtt
atttttaaaactccatctatgagaatagatagaccggaatttgttaaggcaaaagaatct
ggagcttatattacatcagaaatggaagagtttataaaatattgtccagctaaagttttt
ggtataacaggaagtgatggtaaaacaactactacaacattagtgtatgaaatgttaaaa
agagaaggttatagaacttgggtaggggggaatataggaacacctttatttgctaatatt
gaagaaatgaaggaagaccatatggttgtattagaactatcaagttttcagcttatgaca
atggatgtatcaccagagatttctttgatcactaatttaagtcctaatcatttagatgtg
cataaagattttgaggaatatgtatgggctaaaaaaaatatatttaagtatcaatcaagt
aataacttgttagtattaaataaagatgatgatttaacaaatgggatggagaatgaagct
ttaggagatgttttaaagtttagtcttgtagaaaaagtatataatggggcttgcttatca
aataataagcttactatacaaggaaaagaagtatgtgattctaaagatataaatcttaaa
ggtaggcataatatagctaatttattagcagctttttgcatggtaaataaatatgtatca
atagatagtatgaaatatgtagctacaaatttttcaggtgtagaacatagatgcgaattt
ataagagaagttaatggggttaaatactataatgattcaatagcatcaagccctagtaga
actttagcaggactaaattcttttgaaaaaccagtaatattaatagctggtggatatgat
aaaaagataccttttgaaccattagcagaaggtggatatgataaaattaaaatattgata
ttaatgggagatacgaagaataaaataagatcagcttttgaaaaagtaatctcctataaa
aagtgtgagatggaaatagttatagtaaatagtatggaggaagctgtgaaagtagctgat
gatatggcggaaaaaggagatataataactttatcaccagcttgtgctagctttgatatg
tatcctaactttgaaataaggggaaatgaatttaagaatatagtaaatagtttataa
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