Clostridium botulinum B1 Okra: CLD_1128
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Entry
CLD_1128 CDS
T00671
Symbol
uvrC
Name
(GenBank) excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
cbb
Clostridium botulinum B1 Okra
Pathway
cbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLD_1128 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbb03400
]
CLD_1128 (uvrC)
DNA repair and recombination proteins [BR:
cbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLD_1128 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_2
UVR
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ACA45375
UniProt:
B1IFW6
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Position
complement(3687961..3689817)
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AA seq
618 aa
AA seq
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MFDLEYQLKNLPDKPGVYLMKNNLGEIIYVGKAKILKNRVRQYFQKSQKHSEKVKAMVKN
IEEFEYIITDSEIEALILECNLIKKYRPKYNILLKDDKHYPFIKVTLAEDFPRVVSTRKV
TKDGSKYFGPYVDGSSVKDIIELIKKTFPIRTCKKNIVEGAKAIRPCLNYQIGLCKAPCA
QYIKKSEYREIIDDVIKLLSGKHLDIVENFKLNMEKAAENLEFEKAAMLRDKINIIEKIG
EKQKIILNNFDNEDYISLYSDGKDTCFQVFFLRNGKIVGREHFIIEDTFDTNSSTLISNF
LKEFYGGTAYIPKTIYVPSIEDEALLEQWLTLKKESKSTIKIPIKGEKKNILVLVEKNAK
TTLENFKLKYLQEKALYDNVLKDLKNILRLQEEPIRIEAFDISNIQGFDSVGSMVVFEKG
RAKPSDYRRFKINTVKGADDYKSMKEILTRRFQHGLSEIKSIQDRKLEFSSGKFSVFPDL
ILMDGGKGQINIALEVLNTFNIDIPVCGMVKDNKHRTRGLIYNGEEIIINKYGSVMKFIT
RVQDEVHRFAISYHRSLRGKNSFHSLLDDIPNIGEKRKKDLLFNFKSIDNIKKATYEELL
SIPSMDKKSAECVLEFFK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatttagaataccaattaaaaaacctgccagataaacctggagtatatttaatg
aaaaataatttaggggaaattatttatgtagggaaagcaaaaatattaaaaaatagagta
aggcaatattttcaaaaatcacaaaaacattctgaaaaggttaaggctatggtgaaaaat
atagaagagtttgagtatataattacagactcagaaatagaagctttaatattagagtgt
aatttaataaaaaaatatagaccaaaatacaatattcttttaaaggatgataaacattat
ccttttataaaagttacattagctgaggactttccaagggtagtttctacaagaaaggtt
acaaaggatggaagtaaatattttgggccttatgtagatggaagttctgtaaaagatatt
atagaattaataaaaaagactttcccaataagaacttgcaagaaaaatatagtagagggg
gctaaggctataagaccttgtctaaattatcaaataggactatgcaaagctccttgcgct
cagtatataaaaaaaagtgagtatagagaaattatagatgatgttataaaattattatca
ggaaaacatctagatatagtagaaaattttaaactaaacatggaaaaggcagcggaaaat
ttagaatttgaaaaagcagctatgttaagagacaaaataaatataatagaaaaaataggt
gaaaaacaaaaaataattttaaataattttgacaatgaagattacatatcattatatagt
gatggaaaggatacatgttttcaagtattctttttaagaaatggaaaaatagttggaagg
gaacattttattatagaagatacttttgatactaattcttctacattgatttctaatttt
ttaaaagaattttatggaggcactgcttatattcctaaaacgatatatgtgcctagcata
gaagatgaagcattactagagcagtggcttacattaaaaaaggaaagtaaatctacaatt
aaaattcctataaaaggggaaaagaaaaacatattagttttggtagaaaaaaatgctaaa
accacattagaaaattttaaattaaaatatttacaagaaaaggctttatatgataatgtt
ttgaaggatttaaaaaatatattaagattacaagaagaacctataagaattgaagccttt
gatatatctaatatacaaggatttgattctgtaggcagtatggtagtctttgaaaaagga
agagcgaaacctagtgattatagaagatttaagataaacacggtaaagggtgctgatgat
tacaaaagcatgaaggaaatattaaccagaaggtttcagcatggtttaagtgaaataaag
tctatacaggatagaaagttagagtttagttcaggaaagttttctgttttcccagattta
atattaatggatggcggaaaaggacaaataaatattgcacttgaggttctaaataccttt
aatatagatatacccgtttgtggtatggttaaagataataaacatagaactagaggttta
atttataacggagaggaaataattataaataaatatggaagtgttatgaagtttattact
agggtacaagatgaagttcataggtttgctataagttatcataggagtttaagaggaaaa
aatagttttcactctttgttagatgatattccaaatataggagaaaaaagaaaaaaagat
ttgctttttaattttaaaagtatagataacataaaaaaagcaacctatgaagaactttta
agcataccatctatggataagaagtcagctgagtgtgtgcttgaattttttaaataa
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